TCONS_00013607-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013607-protein
Unique NameTCONS_00013607-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length414

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013607-protein ID=TCONS_00013607-protein|Name=TCONS_00013607-protein|organism=Clytia hemisphaerica|type=polypeptide|length=414bp
MHNPGRSIKVSLVTSKFALFSCQVLEKISRKYDAAIIIKLKMGKKKKRGG
NKKKGDENIAIDNEAAESENVQEESKEEKDETEEEKSKFTVEDLMTRVEQ
YLENFEHNMALMFCQKALDMEPNNVKIHECYGNVYAETGDVGNAMKHFNE
AVRLEPDTGHVKYLYLGQITEGREAVQHYEKGIVIMKETIEYQKNNKEKR
DDEKPLSNGDVANVYCSLAEIFMTDCCMEDDAEEQCEKYCKLAVETDEKS
LDAAVSMSNLLLNQSKMDDAKKATEKALSLWTELSANIEEDSIPENLSYE
ARVTLIKLLIEVEIYDKVSPIVDQLIEENEDDIRIWYYLGLAKSLMKDTD
NPRFYLEKALELIEKTGFQNDDMIAHIEQLLVDCPPEDEMDVIEEGDEDE
GDFENENEGQMDVE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007594XLOC_007594Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013607TCONS_00013607Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 61..92
NoneNo IPR availableGENE3D1.20.58.280coord: 145..176
e-value: 2.1E-5
score: 23.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..88
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 333..366
e-value: 18.0
score: 12.6
coord: 125..158
e-value: 2.2
score: 17.3
coord: 251..284
e-value: 160.0
score: 4.3
coord: 91..124
e-value: 17.0
score: 12.9
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 132..157
e-value: 0.014
score: 15.5
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 333..366
score: 6.343
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 125..158
score: 11.24
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 91..124
score: 6.815
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 251..284
score: 5.517
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 297..376
e-value: 3.2E-5
score: 23.7
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 177..296
e-value: 3.4E-7
score: 29.4
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 78..144
e-value: 1.5E-10
score: 40.6
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 238..364
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 234..280
coord: 101..199
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 299..366
score: 7.037
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 91..158
score: 15.863

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013607-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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