TCONS_00013193-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013193-protein
Unique NameTCONS_00013193-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length308

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013193-protein ID=TCONS_00013193-protein|Name=TCONS_00013193-protein|organism=Clytia hemisphaerica|type=polypeptide|length=308bp
XNIILNRLQPWYEAQLSDEQNGFRKDRGTTDGIFELSRVQQITNRKKQPL
FLLFVDLSAAFDHIPRHWLFESIKMRFPDNNLPPLFTILEQLYKQTTLTF
QESNTFQTTSGVRQGGPESPFLFNLYIDFVMPVFMSEANAESINFYKHSY
RLNPRSISRANRISMRENNLRNWGTSTLPWCGYADDLILFLISQLDLQSS
INFLDQTFTRFGLSINALKTESMILSCTEQDYPKSIIKLRNXKRLHEICG
TSDLSNFIGKQQLEYAKHVIRMTHGRSIKLLMFNDDKYTKRGRPFKTLLD
QVTDQNSL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007374XLOC_007374Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013193TCONS_00013193Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 25..239
e-value: 1.7E-21
score: 76.2
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 3..231
e-value: 1.98564E-28
score: 108.533
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 4..141
coord: 175..225
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 2..225
e-value: 3.8E-27
score: 95.1
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..262
score: 17.28

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013193-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top