TCONS_00013186-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00013186-protein
Unique Name	TCONS_00013186-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	451

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00013186-protein ID=TCONS_00013186-protein|Name=TCONS_00013186-protein|organism=Clytia hemisphaerica|type=polypeptide|length=451bp
MKDYDNLTHLSLNVRVYKKRWLILLVFSINSLANSMLFTCITSINLIISK
YYGISPELTDWASNSFPFVFVFIALPFAYFMDSFGVRTLLLVGSSLNAIC
VCLHLAGTFRQQGIWFVLAGQFVAAFSVGAYLQVTTVASVWFPESEQAIA
TSIALACNIIGNSIGYLQPSYMVPDSENMDKIYKGLLEMNISHVAFLGMC
LISTYLFFEEKPLLPPSYAKAVVDNTNHPEQCVETPGFKTSLKTLITDKN
FVIFSFVFGISFGLNNMFLICLNQMSTHITNSTFIGWIGFFGNISSFFGI
LMFAAILDKYKCYRKMTILLFSLQIVCWVLFSIVLLYLKTTVSLFLTYIL
LSFCNVPFMTVGLTYVTELTYPIPEIFSTALIMIFGSLCEVVFVLVFGKL
IDEQLLFLMCTIVGGLYAVGFLLTFFIKENLKRSQIESQKSSIPSTSPKG
V

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007367	XLOC_007367	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00013186	TCONS_00013186	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 239..442 e-value: 4.6E-17 score: 61.5
None	No IPR available	GENE3D	1.20.1250.20		coord: 12..223 e-value: 8.5E-21 score: 73.7
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 29..370 e-value: 3.7E-20 score: 72.1
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 24..428 e-value: 2.40329E-13 score: 68.4945
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 15..434

Blast

[Close]

BLAST of TCONS_00013186-protein vs. Swiss-Prot (Human)
Match: FLVC2 (Feline leukemia virus subgroup C receptor-related protein 2 OS=Homo sapiens GN=FLVCR2 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.802e-43
Identity = 122/436 (27.98%), Postives = 220/436 (50.46%), Query Frame = 0

Query:   14 VRVYKKRWLILLVFSINSLANSMLFTCITSINLIISKYYGISPELTDWASNSFPFVFVFIALPFAYFMDSFGVRTLLLVGSSLNAICVCLHLAGTFRQQGIWFVLAGQFVAAFSVGAYLQV-TTVASVWFPESEQAIATSIALACNIIGNSIGYLQPSYMVPDSENMDKI--YKGLLEMNISHVAFLGMCLISTYLFFEEKPLLPPSYAKAVVDNTNHPEQCVETPGFKTSLKTLITDKNFVIFSFVFGISFGLNNMFLICLNQMS--THITNSTFIGWIGFFGNISSFFGILMFAAILDKYKCYRKMTILLFSLQIVCWVLFSIVLLYLKTTVSLFLTYILLSFCNVPFMTVGLTYVTELTYPIPEIFSTALIMIFGSLCEVVFVLVFGKLIDEQLLFLMCTIVGGLY-----AVGFLLTFFIKENLKRSQIESQ 439
            ++V ++RW ++LVFS  S+ NS  +    SIN I   +YG+S    DW S  +   ++ + LP A+ ++ FG+RT+ L GS+LN +   + L G+ +       + GQ + + +    L + + +ASVWF  +E + A S+A+  N +G +IG+L P  +VP+ E+ D++  +  ++   I  VA L   LI   + F+EKP  PPS A+++      P+       +  S+  L  + NFV+    +G++ G        LN+M    +       G IG    I+   G ++    LD+ K Y++ T++++ + +V  V+++   L L     +F+T   + F    ++ +G  +  ELTYP  E  S+ L+ I   +  ++F +  G++ID        T  G ++      +G  LT FIK +L+R +   +
Sbjct:   78 IKVSRRRWAVVLVFSCYSMCNSFQWIQYGSINNIFMHFYGVSAFAIDWLSMCYMLTYIPLLLPVAWLLEKFGLRTIALTGSALNCLGAWVKL-GSLKPHLFPVTVVGQLICSVAQVFILGMPSRIASVWFGANEVSTACSVAVFGNQLGIAIGFLVPPVLVPNIEDRDELAYHISIMFYIIGGVATL--LLILVIIVFKEKPKYPPSRAQSLSYALTSPDAS-----YLGSIARLFKNLNFVLLVITYGLNAGAFYALSTLLNRMVIWHYPGEEVNAGRIGLTIVIAGMLGAVISGIWLDRSKTYKETTLVVYIMTLVGMVVYTFT-LNLGHLWVVFITAGTMGFFMTGYLPLGFEFAVELTYPESEGISSGLLNISAQVFGIIFTISQGQIIDN-----YGTKPGNIFLCVFLTLGAALTAFIKADLRRQKANKE 499

The following BLAST results are available for this feature:

BLAST of TCONS_00013186-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00013186-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FLVC2	5.802e-43	27.98	Feline leukemia virus subgroup C receptor-related ...	[more]

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TCONS_00013186-protein (polypeptide) - C. hemisphaerica