TCONS_00012725-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012725-protein
Unique NameTCONS_00012725-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length156

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012725-protein ID=TCONS_00012725-protein|Name=TCONS_00012725-protein|organism=Clytia hemisphaerica|type=polypeptide|length=156bp
MLAMEQMLRKYLSQKVFLYTTDPIIDQALQCGSISSLYRTVDFGAGHDVN
KSFALQRKYQPKGPYVNSEYYTGWFDNWGEGHHAERPEYIAHYLDQILSF
ENASVNLYLFEGGSNRNFMNGGSSCVHVSFIQFLTTFLVKKLNFDGNIQF
SIFELK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007137XLOC_007137Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012725TCONS_00012725Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031330Gly_Hdrlase_35_cat
IPR017853Glycoside_hydrolase_SF
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.20.80coord: 1..141
e-value: 4.4E-14
score: 51.9
IPR031330Glycoside hydrolase 35, catalytic domainPFAMPF01301Glyco_hydro_35coord: 3..124
e-value: 1.5E-20
score: 74.0
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 5..135

Blast
[Close]
BLAST of TCONS_00012725-protein vs. Swiss-Prot (Human)
Match: BGAL (Beta-galactosidase OS=Homo sapiens GN=GLB1 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 2.287e-30
Identity = 55/121 (45.45%), Postives = 78/121 (64.46%), Query Frame = 0 
Query:    4 MEQMLRKYLSQKVFLYTTDPIIDQALQCGSISSLYRTVDFGAGHDVNKSFALQRKYQPKGPYVNSEYYTGWFDNWGEGHHAERPEYIAHYLDQILSFENASVNLYLFEGGSNRNFMNGGSS 124
            +++  R +L   V L+TTD      L+CG++  LY TVDFG G ++  +F  QRK +PKGP +NSE+YTGW D+WG+ H   + E +A  L  IL+   ASVNLY+F GG+N  + NG +S
Sbjct:  203 LQKRFRHHLGDDVVLFTTDGAHKTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILA-RGASVNLYMFIGGTNFAYWNGANS 322
The following BLAST results are available for this feature:
BLAST of TCONS_00012725-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BGAL2.287e-3045.45Beta-galactosidase OS=Homo sapiens GN=GLB1 PE=1 SV... [more]
back to top