TCONS_00012696-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00012696-protein
Unique Name	TCONS_00012696-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	349

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00012696-protein ID=TCONS_00012696-protein|Name=TCONS_00012696-protein|organism=Clytia hemisphaerica|type=polypeptide|length=349bp
MCRHVGVVTCLLVCMLTRSQGWHLYGNRQSDERLNYQDIRDERLNRLYND
LVEYKKQSNDYQQVNQPINDEDMNKALNKIPENDQLFEGDMVMDNRLREA
VLGISKKSVVTGDVKWPNQTLVYEIDANFVNVPLLKEGIHEFETRTCIRF
KLRTNEPDYVYYTSKENVCSSNIGKVGGKQEIHIGKDCMVLGTIIHETMH
ALGFIHEHSRPDRDEYLKVNWENIEKDEWSNFNKYSGFEVSDENVGYNFA
SLMHYRNDAFTMNGKDTLIAKGDESLKFGQRIKFSVGDVRGINRFYQCHA
YLDTPNYNGLFKDYSGVKDEHKEKEKRLENVLNKFRDRFYDRKMRRGYY

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007131	XLOC_007131	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00012696	TCONS_00012696	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001506	Peptidase_M12A
IPR006026	Peptidase_Metallo
IPR024079	MetalloPept_cat_dom
IPR034035	Astacin-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004222	metalloendopeptidase activity
GO:0008237	metallopeptidase activity
GO:0008270	zinc ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0008270	zinc ion binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 44..64
None	No IPR available	COILS	Coil	Coil	coord: 314..338
None	No IPR available	SUPERFAMILY	55486	Metalloproteases ("zincins"), catalytic domain	coord: 112..299
IPR001506	Peptidase M12A	PRINTS	PR00480	ASTACIN	coord: 188..206 score: 52.19 coord: 207..224 score: 52.59 coord: 135..153 score: 30.18 coord: 246..261 score: 40.73 coord: 284..297 score: 35.48
IPR001506	Peptidase M12A	PFAM	PF01400	Astacin	coord: 115..299 e-value: 5.0E-57 score: 192.5
IPR006026	Peptidase, metallopeptidase	SMART	SM00235	col_5	coord: 112..251 e-value: 3.9E-38 score: 142.7
IPR024079	Metallopeptidase, catalytic domain	GENE3D	3.40.390.10		coord: 107..300 e-value: 6.9E-53 score: 179.1
IPR034035	Astacin-like metallopeptidase domain	CDD	cd04280	ZnMc_astacin_like	coord: 118..296 e-value: 6.36299E-75 score: 230.536

Blast

[Close]

BLAST of TCONS_00012696-protein vs. Swiss-Prot (Human)
Match: TLL2 (Tolloid-like protein 2 OS=Homo sapiens GN=TLL2 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.633e-32
Identity = 68/196 (34.69%), Postives = 107/196 (54.59%), Query Frame = 0

Query:  116 WPNQTLVYEIDANFVNV--PLLKEGIHEFETRTCIRFKLRTNEPDYVYYTSKENVCSSNIGK-VGGKQEIHIGKDCMVLGTIIHETMHALGFIHEHSRPDRDEYLKVNWENIEKDEWSNFNKYSGFEVSDENVGYNFASLMHYRNDAFTMNG-KDTLIAKGDES---LKFGQRIKFSVGDVRGINRFYQCHAYLDT 304
            WP   + Y I  NF      + K+ +  +E  TC+ F  RT+E  ++ ++ +   C S +G+  GG Q I IGK+C   G + HE  H +GF HEH+RPDRD+++ +  ENI+  +  NF K    EVS     Y+F S+MHY  + F+     DT++ + D++      GQR++ S GD+    + Y+C A  +T
Sbjct:  159 WPGGVIPYVIGGNFTGSQRAIFKQAMRHWEKHTCVTFIERTDEESFIVFSYRTCGCCSYVGRRGGGPQAISIGKNCDKFGIVAHELGHVVGFWHEHTRPDRDQHVTIIRENIQPGQEYNFLKMEAGEVSSLGETYDFDSIMHYARNTFSRGVFLDTILPRQDDNGVRPTIGQRVRLSQGDIAQARKLYKCPACGET 354

The following BLAST results are available for this feature:

BLAST of TCONS_00012696-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00012696-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TLL2	1.633e-32	34.69	Tolloid-like protein 2 OS=Homo sapiens GN=TLL2 PE=...	[more]

You are here

TCONS_00012696-protein (polypeptide) - C. hemisphaerica