TCONS_00012648-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012648-protein
Unique NameTCONS_00012648-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length899

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012648-protein ID=TCONS_00012648-protein|Name=TCONS_00012648-protein|organism=Clytia hemisphaerica|type=polypeptide|length=899bp
MYRICKYTKNLLNQGSRAKRVAFSTQASLFSAAEDKSSVPEYADAVIIGG
GSIGCSTAYHLALHGMKNIVLLEKDKLSAGTTWHSAGLVWRNQPSDLSIE
LLNYTRHLAHFVLEKETGLSTGYNENGGLFIANNKERLQEYQRLQTLGKV
YGVESYILSPKESKELYPLMNIDDLYGTMYSPGDGTIDPSSWTSALSKGA
MMRGAKVVEGCEVTGVDTNIDDFGARKVTGVKTTKGEIKTNCLVNACGAW
SPYIGGMCGVSVPLVAMKHAYIITEKIEGIRGMPSIRDHDASVYLKMLGD
ELHIGGYENNPIFIDRIAKDFAFSLYDLDWDVFSTHIEGAINRVPIVEHT
EVKSTVCGPESFTADHKALVGPDIDLRGFYHACGFNSSGIMYAGGCGNQL
AKWIIHGHPDLDMFAYDPSRFHHSLTSNKKWNYERSHEAYAKNYSMVFPH
DEPLASRNMRKDPLHEEMVKAGCHFQERHGWERPGYFVKGDDPEVLDYDW
YGNAADYEEPTPKHENYGYDKLLVGDYTFDFSEHFHKIGNEAFACRDSVA
AFNMSYFAKFLLDGPDAEKAVDWIFTANMRKQPGSTTYTCMLNDKGGIMA
DLTVSTLDQGDGSNLFSPKTDGKGYYLAIGGAIGQFAWCHLQREIHAQKF
NVNLKDVSEQAGMLSIQGPNSRTLLEELTGQDLSNEAFPFSTHKEVVIAG
HKVRAIRLTFVGELGWELHIPAESCVDVYRAVMNAGEKHGIANAGYRAID
DLSIEKGYRHWHADIRDTDTPLESGLAFTCKMKSDVPFQGRSVLEQQKVD
GLKKKLACFTIDEHRALLGSEGIYRNGEIVGFLRRGGFGYSIGKSIGYGY
VEDPQGGVVNNAFLKEGEYQIERMGKMIPATLHLKSLFDGKNNRIKGNY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007094XLOC_007094Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012648TCONS_00012648Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013977GCV_T_C
IPR032503FAO_M
IPR006076FAD-dep_OxRdtase
IPR006222GCV_T_N
IPR023753FAD/NAD-binding_dom
IPR029043GcvT/YgfZ_C
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013977Glycine cleavage T-protein, C-terminal barrel domainPFAMPF08669GCV_T_Ccoord: 788..883
e-value: 8.8E-12
score: 45.0
IPR013977Glycine cleavage T-protein, C-terminal barrel domainGENE3D2.40.30.110coord: 800..883
e-value: 1.6E-16
score: 59.2
NoneNo IPR availableGENE3D4.10.1250.10coord: 757..798
e-value: 1.9E-8
score: 33.8
NoneNo IPR availableGENE3D3.30.9.10coord: 134..211
e-value: 7.9E-6
score: 25.4
NoneNo IPR availableGENE3D3.30.1360.120coord: 459..643
e-value: 4.3E-35
score: 120.0
NoneNo IPR availableGENE3D3.30.1360.120coord: 644..755
e-value: 4.0E-25
score: 87.9
NoneNo IPR availableGENE3D3.40.50.720coord: 1..133
e-value: 4.3E-5
score: 22.6
NoneNo IPR availableGENE3D3.30.9.10coord: 212..363
e-value: 5.0E-31
score: 107.0
NoneNo IPR availableSUPERFAMILY103025Folate-binding domaincoord: 457..801
NoneNo IPR availableSUPERFAMILY54373FAD-linked reductases, C-terminal domaincoord: 264..363
IPR032503FAD dependent oxidoreductase, central domainPFAMPF16350FAO_Mcoord: 406..460
e-value: 2.8E-17
score: 62.7
IPR006076FAD dependent oxidoreductasePFAMPF01266DAOcoord: 44..402
e-value: 1.5E-58
score: 199.0
IPR006222Glycine cleavage T-protein-like, N-terminalPFAMPF01571GCV_Tcoord: 464..778
e-value: 4.1E-62
score: 209.8
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 44..264
coord: 364..449
IPR029043Glycine cleavage T-protein/YgfZ, C-terminal domainSUPERFAMILY101790Aminomethyltransferase beta-barrel domaincoord: 804..897

Blast
[Close]
BLAST of TCONS_00012648-protein vs. Swiss-Prot (Human)
Match: SARDH (Sarcosine dehydrogenase, mitochondrial OS=Homo sapiens GN=SARDH PE=1 SV=1)

HSP 1 Score: 1098.96 bits (2841), Expect = 0.000e+0
Identity = 510/881 (57.89%), Postives = 645/881 (73.21%), Query Frame = 0 
Query:   19 KRVAFSTQASLFSAAEDKSSVPEYADAVIIGGGSIGCSTAYHLALHGMKNIVLLEKDKLSAGTTWHSAGLVWRNQPSDLSIELLNYTRHLAHFVLEKETGLSTGYNENGGLFIANNKERLQEYQRLQTLGKVYGVESYILSPKESKELYPLMNIDDLYGTMYSPGDGTIDPSSWTSALSKGAMMRGAKVVEGCEVTGVDTNIDDFGARKVTGVKTTKGEIKTNCLVNACGAWSPYIGGMCGVSVPLVAMKHAYIITEKIEGIRGMPSIRDHDASVYLKMLGDELHIGGYENNPIFIDRIAKDFAFSLYDLDWDVFSTHIEGAINRVPIVEHTEVKSTVCGPESFTADHKALVGPDIDLRGFYHACGFNSSGIMYAGGCGNQLAKWIIHGHPDLDMFAYDPSRFHHSLTSNKKWNYERSHEAYAKNYSMVFPHDEPLASRNMRKDPLHEEMVKAGCHFQERHGWERPGYFVKGDDPEVLDYDWYGNAADYEEPTPKHENYGYDKLLVGDYTFDFSEHFHKIGNEAFACRDSVAAFNMSYFAKFLLDGPDAEKAVDWIFTANMRKQPGSTTYTCMLNDKGGIMADLTVSTLDQGDGSNLFSPKTDGKGYYLAIGGAIGQFAWCHLQREIHAQKFNVNLKDVSEQAGMLSIQGPNSRTLLEELTGQDLSNEAFPFSTHKEVVIAGHKVRAIRLTFVGELGWELHIPAESCVDVYRAVMNAGEKHGIANAGYRAIDDLSIEKGYRHWHADIRDTDTPLESGLAFTCKMKSDVPFQGRSVLEQQKVDGLKKKLACFTIDEHRALLGSEGIYRNGEIVGFLRRGGFGYSIGKSIGYGYVEDPQGGVVNNAFLKEGEYQIERMGKMIPATLHLKSLFDGKNNRIKGNY 899
            +R     Q +   A      +P  A+ V+IGGGS+GC T YHLA  GM   VLLE+++L++GTTWH+AGL+W+ +PSD+ +ELL +TR +    LE+ETGL TG+ +NGGLFIA+N++RL EY+RL +LGK YGVES++LSP E+K LYPLMN+DDLYGT+Y P DGT+DP+   + L++ A  RGA+V+E C VTG+    DDFG R+V GV+T  G I+T C+VN  G W+  +G M GV VPLVAM HAY++TE+IEGI+ MP++RDHDASVYL++ GD L +GGYE NPIF + ++  FAF L+DLDW+VF+ HIEGAINRVP++E T +KSTVCGPESFT DHK L+G   +LRGF+  CGFNS+G+M  GGCG +LA WIIHG P+ DM  YD  RFHHSLT + +W  ERSHE+YAKNYS+VFPHDEPLA RNMR+DPLHEE++  GC FQERHGWERPG+F       VL+YD+YG        +  HE+Y Y +LL  +YTF F  H   I  E  ACR + A F+MSYF KF L G DA KA DW+F+A++ + PGST YTCMLN +GG  +DLTVS L     ++  +P  +G GYYLA+GGA+ Q  W H+   +  QK    L D SE  GM+SIQGP SR +L+E+   DLSNEAFPFSTHK +  AGH VRA+RL+FVGELGWELHIP  SCV VYRAVM AG KHG+ NAGYRAID LSIEKGYRHWHAD+R  D+PLE+GLAFTCK+KS VPF GR  LEQQ+  GL+++L CFT+++   + G E I+RNG++VG +RR  FG++I K+I YGY+ DP GG V+  F+K G+Y +ERMG    A  HLKS FD  N R+KG Y
Sbjct:   43 QRTLKEGQGTSVVAQGPSRPLPSTANVVVIGGGSLGCQTLYHLAKLGMSGAVLLERERLTSGTTWHTAGLLWQLRPSDVEVELLAHTRRVVSRELEEETGLHTGWIQNGGLFIASNRQRLDEYKRLMSLGKAYGVESHVLSPAETKTLYPLMNVDDLYGTLYVPHDGTMDPAGTCTTLARAASARGAQVIENCPVTGIRVWTDDFGVRRVAGVETQHGSIQTPCVVNCAGVWASAVGRMAGVKVPLVAMHHAYVVTERIEGIQNMPNVRDHDASVYLRLQGDALSVGGYEANPIFWEEVSDKFAFGLFDLDWEVFTQHIEGAINRVPVLEKTGIKSTVCGPESFTPDHKPLMGEAPELRGFFLGCGFNSAGMMLGGGCGQELAHWIIHGRPEKDMHGYDIRRFHHSLTDHPRWIRERSHESYAKNYSVVFPHDEPLAGRNMRRDPLHEELLGQGCVFQERHGWERPGWFHPRGPAPVLEYDYYGAYG-----SRAHEDYAYRRLLADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLVGLDARKAADWLFSADVSRPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWSHITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAAGHLVRAMRLSFVGELGWELHIPKASCVPVYRAVMAAGAKHGLINAGYRAIDSLSIEKGYRHWHADLRPDDSPLEAGLAFTCKLKSPVPFLGREALEQQRAAGLRRRLVCFTMEDKVPMFGLEAIWRNGQVVGHVRRADFGFAIDKTIAYGYIHDPSGGPVSLDFVKSGDYALERMGVTYGAQAHLKSPFDPNNKRVKGIY 918
The following BLAST results are available for this feature:
BLAST of TCONS_00012648-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SARDH0.000e+057.89Sarcosine dehydrogenase, mitochondrial OS=Homo sap... [more]
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