TCONS_00012471-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012471-protein
Unique NameTCONS_00012471-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length403

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012471-protein ID=TCONS_00012471-protein|Name=TCONS_00012471-protein|organism=Clytia hemisphaerica|type=polypeptide|length=403bp
MEQFNIANLRIFYKLLFSGKLSTLLHVQEYLSYAIKVLELATKYTWQSVL
HYDDEFRILQHTYGFSWSTDHSHLHEVVLIPRWAAKLPRGLGQSTDTSSS
KSDSSLFGLAGNNKGFGPAIMTHLSSGSEICRMFNSRKGCQKSPCRFAHA
CNRKVGSQACGKXQSFQTLDDACRLIGKGFFIAKIDLRHAYRSVSVHPAN
RDALGLKWKFSGDKHYTYLKDTRFPFGAHSAPGIFHRLTQSVRRMMQRRG
FPLIIVYLDDFLIIGRSQHECQAAFVALSSLLVSLGFTISPSKVVPPCQK
LVFLGVEIDTTTLTLSLPDKKLGDLKDVLMSFQSRTRASKRQLQQLAGRL
NWACKVIYGGRTFLRRILDLMGSLQKQSSKCLLSEEFFKDISWWLDFLEI
FNG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007010XLOC_007010Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012471TCONS_00012471Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR000571Znf_CCCH
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 169..307
e-value: 1.2E-11
score: 44.5
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..308
score: 12.114
NoneNo IPR availableGENE3D3.30.70.270coord: 129..308
e-value: 2.9E-16
score: 59.1
NoneNo IPR availableGENE3D3.30.70.270coord: 336..391
e-value: 0.0013
score: 18.4
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 170..397
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 125..152
score: 8.784

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012471-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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