TCONS_00012414-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012414-protein
Unique NameTCONS_00012414-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length495

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012414-protein ID=TCONS_00012414-protein|Name=TCONS_00012414-protein|organism=Clytia hemisphaerica|type=polypeptide|length=495bp
MALFLRKHTGTPFKHAQVLSRSFAVRGVEMPSTDFQPAEFKGMPYDEARA
AHAKNLFPHVSERMLLYKRPVYLTQGHMQWLWDSEGKRYLDLFAGIATCG
VGHCHPKITESIQDQASKLVHCSNLYINAKQAEYAEKLLTKLPEKYNRVY
FVNSGSEANDFAMTMMRVYTGSWDIIGLRNAYHGASPTTLGITNMGQYKF
PTPQNFGCHTIPNPDVYKGIWGGKNCRDSPVQADRDCDCAEGVCEATDLY
LGQLEDVLTNVTPPKVAGFFGEPIQGVGGSVQYPRDFLQKTYEKIHARGG
LCVADEVQTGFGRTGSHYWGFQGSGLNPDIIVCAKTIANGLPMACVITTK
EIADSMNVALPFNTYSSNPVSCAAAITALDVIDEEGLQENCQRVGTYCLE
ELSKIRDDYEIVGDVRGKGLMIGIEMVADKKTRAPLQPERVGDIIERTKD
YGVLFGKGGRFGQVLRIKPPMNVTKEDIDFGLAVLRQSIEEHLAQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006972XLOC_006972Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012414TCONS_00012414Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005814Aminotrans_3
IPR015421PyrdxlP-dep_Trfase_major_sub1
IPR015422PyrdxlP-dep_Trfase_sub2
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Molecular Function
TermDefinition
GO:0008483transaminase activity
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0008483 transaminase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005814Aminotransferase class-IIIPIRSFPIRSF000521Transaminase_4ab_Lys_Orncoord: 67..174
e-value: 2.7E-9
score: 33.8
coord: 165..492
e-value: 2.7E-26
score: 89.9
IPR005814Aminotransferase class-IIIPFAMPF00202Aminotran_3coord: 71..487
e-value: 2.1E-87
score: 293.4
IPR005814Aminotransferase class-IIIPROSITEPS00600AA_TRANSFER_CLASS_3coord: 302..340
IPR005814Aminotransferase class-IIICDDcd00610OAT_likecoord: 51..489
e-value: 2.25482E-144
score: 422.363
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1GENE3D3.40.640.10coord: 95..371
e-value: 4.5E-72
score: 242.2
IPR015422Pyridoxal phosphate-dependent transferase, subdomain 2GENE3D3.90.1150.10coord: 372..493
e-value: 4.7E-35
score: 119.9
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 57..491

Blast
[Close]
BLAST of TCONS_00012414-protein vs. Swiss-Prot (Human)
Match: AGT2 (Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Homo sapiens GN=AGXT2 PE=1 SV=1)

HSP 1 Score: 499.59 bits (1285), Expect = 4.434e-174
Identity = 237/467 (50.75%), Postives = 305/467 (65.31%), Query Frame = 0 
Query:   30 MPSTDFQPAEFKGMPYDEARAAHAKNLFPHVSERMLLYKRPVYLTQGHMQWLWDSEGKRYLDLFAGIATCGVGHCHPKITESIQDQASKLVHCSNLYINAKQAEYAEKLLTKLPEKYNRVYFVNSGSEANDFAMTMMRVYTGSWDIIGLRNAYHGASPTTLGITNMGQYKFPTPQNFGCHTIPNPDVYKGIWGGKNCRDSPVQADRDCDCAEGVCEATDLYLGQLEDVLTNVTPPKVAGFFGEPIQGVGGSVQYPRDFLQKTYEKIHARGGLCVADEVQTGFGRTGSHYWGFQGSGLNPDIIVCAKTIANGLPMACVITTKEIADSMNVALP-FNTYSSNPVSCAAAITALDVIDEEGLQENCQRVGTYCLEELSKIRDDYEIVGDVRGKGLMIGIEMVADKKTRAPLQPERVGDIIERTKDYGVLFGKGGRFGQVLRIKPPMNVTKEDIDFGLAVLRQSIEEHLAQ 495
            MP  DF P  ++ + Y+     H ++L P V+     +++P+ L QGHM+WL+D+EG RYLD F+GI T  VGHCHPK+    Q Q  +L H S ++ +    EYAEKL   LPE    ++ VNSGSEAN+ AM M R ++ + DII  R AYHG SP TLG+TN+G YK   P   GC     PDV++G WGG +CRDSPVQ  R C CA   C+A D Y+ Q +D L+      +AGFF EPIQGV G VQYP+ FL++ +E + ARGG+C+ADEVQTGFGR GSH+WGFQ   + PDI+  AK I NG PMA VITT EIA S+   L  FNT+  NP++CA     L+VI EE LQEN Q VGTY L + +K+RD++EIVGDVRGKGLMIGIEMV DK +  PL  E V  I E  K  G+L G+G  F Q  RI P M +TK ++DF + V R ++ +H+ +
Sbjct:   48 MPPCDFMPERYQSLGYNRVLEIHKEHLSPVVTA---YFQKPLLLHQGHMEWLFDAEGSRYLDFFSGIVTVSVGHCHPKVNAVAQKQLGRLWHTSTVFFHPPMHEYAEKLAALLPEPLKVIFLVNSGSEANELAMLMARAHSNNIDIISFRGAYHGCSPYTLGLTNVGTYKMELPGGTGCQPTMCPDVFRGPWGGSHCRDSPVQTIRKCSCAPDCCQAKDQYIEQFKDTLSTSVAKSIAGFFAEPIQGVNGVVQYPKGFLKEAFELVRARGGVCIADEVQTGFGRLGSHFWGFQTHDVLPDIVTMAKGIGNGFPMAAVITTPEIAKSLAKCLQHFNTFGGNPMACAIGSAVLEVIKEENLQENSQEVGTYMLLKFAKLRDEFEIVGDVRGKGLMIGIEMVQDKISCRPLPREEVNQIHEDCKHMGLLVGRGSIFSQTFRIAPSMCITKPEVDFAVEVFRSALTQHMER 511
The following BLAST results are available for this feature:
BLAST of TCONS_00012414-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGT24.434e-17450.75Alanine--glyoxylate aminotransferase 2, mitochondr... [more]
back to top