TCONS_00012270-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012270-protein
Unique NameTCONS_00012270-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length365

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012270-protein ID=TCONS_00012270-protein|Name=TCONS_00012270-protein|organism=Clytia hemisphaerica|type=polypeptide|length=365bp
MEHRLLIIAWIFIILIVMEKQLAEARWWMYSRVLTEETGFTTKDDNRICH
FYHLNNNQLQACLSEPKLLLYVGQGTSAGLSACQSQFYFSRWNCSSNVHK
LYKRKTPESAYVNAISSAGVIYKISYECDRGKIKNCGCTLKQHQRSLVAK
PAPDKDKNPFFWSDCNNHLRYGMRMTKIFLDPSKEDTYQGQRKRSLRHLI
TIQNNKAARKVVTSISKEHHKCVCHGPTGHCVSKVCYKWLPHIKVVAKKL
YKQYQKALRVTLKNHYKLVSDEDRVLSKNDLVYTERLDYCERKEELGIPG
TRGRACSNHKPREPDDMQSCQVFCCDRGYREAVVQRKVKCGCKFKWCCEM
NCKWCDEQQMTYRCR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006909XLOC_006909Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012270TCONS_00012270Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005817Wnt
Vocabulary: Molecular Function
TermDefinition
GO:0005102receptor binding
Vocabulary: Biological Process
TermDefinition
GO:0007275multicellular organism development
GO:0016055Wnt signaling pathway
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0016055 Wnt signaling pathway
cellular_component GO:0005576 extracellular region
molecular_function GO:0005102 receptor binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005817WntPRINTSPR01349WNTPROTEINcoord: 160..172
score: 30.77
coord: 126..139
score: 36.59
coord: 223..237
score: 44.15
coord: 107..121
score: 52.9
IPR005817WntSMARTSM00097wnt1_3coord: 50..365
e-value: 1.1E-44
score: 164.5
IPR005817WntPFAMPF00110wntcoord: 53..365
e-value: 3.2E-74
score: 250.2

Blast
[Close]
BLAST of TCONS_00012270-protein vs. Swiss-Prot (Human)
Match: WNT2 (Protein Wnt-2 OS=Homo sapiens GN=WNT2 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.315e-55
Identity = 111/323 (34.37%), Postives = 170/323 (52.63%), Query Frame = 0 
Query:   54 LNNNQLQACLSEPKLLLYVGQGTSAGLSACQSQFYFSRWNCSS--NVHKLYKR----KTPESAYVNAISSAGVIYKISYECDRGKIKNCGCTLKQHQRSLVAKPAPDKD-KNPFFWSDCNNHLRYGMRMTKIFLDPSKEDTYQGQRKRSLRHLITIQNNKAARKVVTSISKEHHKCVCHGPTGHCVSKVCYKWLPHIKVVAKKLYKQYQKALRVTLK---NHYKLVSDEDRVLSKNDLVYTERL-DYCERKEELGIPGTRGRACSNHKPREPDDMQSCQVFCCDRGYREAVVQRKVKCGCKFKWCCEMNCKWCDEQQMTYRCR 365
            L ++Q Q C   P ++  + QG +   + CQ QF   RWNC++    H L+ R     + ESA+V AISSAGV++ I+  C +G++K+C C  K        K    KD K  F W  C++++ YG++  + F+D  +      ++ +  R L+ + NN+A RK V    K+  +C CHG +G C  + C+  +   +     L+++Y  A++V +      + + ++  +  +KNDLVY E   DYC R  E G  GT GR C N   R    M SC+V CC RGY  + V R  KCGCKF WCC + C+ C E    + C+
Sbjct:   47 LVSSQRQLCHRHPDVMRAISQGVAEWTAECQHQFRQHRWNCNTLDRDHSLFGRVLLRSSRESAFVYAISSAGVVFAITRACSQGEVKSCSCDPK--------KMGSAKDSKGIFDWGGCSDNIDYGIKFARAFVDAKE------RKGKDARALMNLHNNRAGRKAVKRFLKQ--ECKCHGVSGSCTLRTCWLAMADFRKTGDYLWRKYNGAIQVVMNQDGTGFTVANERFKKPTKNDLVYFENSPDYCIRDREAGSLGTAGRVC-NLTSR---GMDSCEVMCCGRGYDTSHVTRMTKCGCKFHWCCAVRCQDCLEALDVHTCK 349
The following BLAST results are available for this feature:
BLAST of TCONS_00012270-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WNT24.315e-5534.37Protein Wnt-2 OS=Homo sapiens GN=WNT2 PE=2 SV=1[more]
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