TCONS_00012144-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012144-protein
Unique NameTCONS_00012144-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length567

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012144-protein ID=TCONS_00012144-protein|Name=TCONS_00012144-protein|organism=Clytia hemisphaerica|type=polypeptide|length=567bp
MWKNETFLKRYKSLLNSMTFQTLESENMDSIEILQNALKSCSLEAYNQLK
NDSDFHSINRKPWWTTELSKSRKLLQSTFNQWRSTNFNRDPHNVHYHRYL
FARKNFRSLVKRCKSQSTVEHYINIEKVKKIKPKSYWSQIRLAKSSPQKL
YTINNKTNTEDITTEFKNHFDTLLNTPRTAQINNTRTNDLLDSLLSDLQE
MDEIDFLVNENDLLTAINNLNKDKAYDPFGIKAEHFIHGFTHPSDQNLSF
LSLTINRILTSKHFPESLATSHLVPIIKSHRKPISDPNNYRGISLIPILT
KLIEQVILQKCPQLKHHADHQYGFSSDGSTLHAEFLINETIQKYNTQNTP
VYICSLDAEKAFDSCNWLELFNKLKLKNILPNTVLQFLIKLYSHGEAKIK
YNSNISKPFSLSQGVRQGSILSPYLYNIYTEDILQEITNLNVGTFLNPNI
NTSIIAFADDLILLSPNLKHLQKMISLCQEKGGNIGLKFNDTKTQFIVSG
NCPIDNPSISMNDKSISPQKTLKHLGFLWDTKSKKITLAKHQENRIQELW
AVTSSLISSGVRKMHPN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006832XLOC_006832Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012144TCONS_00012144Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 308..527
e-value: 2.1E-28
score: 98.7
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 270..528
e-value: 6.56118E-45
score: 157.838
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 160..498
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 287..527
e-value: 2.4E-36
score: 125.3
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 257..529
score: 19.146

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012144-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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