TCONS_00011880-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00011880-protein
Unique Name	TCONS_00011880-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	481

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00011880-protein ID=TCONS_00011880-protein|Name=TCONS_00011880-protein|organism=Clytia hemisphaerica|type=polypeptide|length=481bp
MAADLEKLVARLEAVTGRLESAASRGGSSGGAAAGNDDPDWYDDYVAFHK
ENFDSFLKATEGLGGDVASIGKLVGNAFSAHKDVVTIAARNGRPSGSDLP
TILIPLSNAITAVQEFRDANRKSAQFNHLSALSEAIPFLGWVSISPKPGQ
YVGQMEESAQFYTNKVLKEFKESDPKQADWARSLIKLLKATTQHVKDNHG
TGLQWNKDKPAATGATKAGGAPSAGGAPPPPPPAAAPPPPPPAPAGGSSG
ASEEVDRSQLFAALNKGGAVTSGLKKVTNDMKTHKNPALRNQGPVAAAKA
SSSLSPRPYSPPKFKKFNAPEVKKPPKFELQDKKWIIEHQDGNQNLVIDR
TNDKQAVYMYKCKNSVLQVQGKINSIVLDNCVKCGVVFTDLISTCEFINC
QSVKAQANGYVPTISIDKTDGCQVFLNEKNLDVQIISAKSSEMNICINNE
DGDLNEFPLPEQYKTVWDGKKFVTTVMDLNL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_006669	XLOC_006669	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00011880	TCONS_00011880	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006599	CARP_motif
IPR013992	Adenylate_cyclase-assoc_CAP_N
IPR013912	Adenylate_cyclase-assoc_CAP_C
IPR018106	CAP_CS_N
IPR028417	CAP_CS_C
IPR017901	C-CAP_CF_C-like

Vocabulary: **Biological Process**
Term	Definition
GO:0007010	cytoskeleton organization

Vocabulary: **Molecular Function**
Term	Definition
GO:0003779	actin binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007010	cytoskeleton organization
molecular_function	GO:0003779	actin binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 5..25
None	No IPR available	GENE3D	2.160.20.70		coord: 324..480 e-value: 1.3E-58 score: 196.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..323
IPR006599	CARP motif	SMART	SM00673	carp	coord: 362..399 e-value: 8.2E-8 score: 42.0 coord: 400..437 e-value: 7.5E-6 score: 35.4
IPR013992	Adenylate cyclase-associated CAP, N-terminal	PFAM	PF01213	CAP_N	coord: 7..296 e-value: 2.0E-89 score: 300.2
IPR013992	Adenylate cyclase-associated CAP, N-terminal	SUPERFAMILY	101278	N-terminal domain of adenylylcyclase associated protein, CAP	coord: 44..206
IPR013912	Adenylate cyclase-associated CAP, C-terminal	PFAM	PF08603	CAP_C	coord: 324..478 e-value: 1.9E-61 score: 206.2
IPR013912	Adenylate cyclase-associated CAP, C-terminal	SUPERFAMILY	69340	C-terminal domain of adenylylcyclase associated protein	coord: 325..478
IPR018106	CAP, conserved site, N-terminal	PROSITE	PS01088	CAP_1	coord: 8..20
IPR028417	CAP, conserved site, C-terminal	PROSITE	PS01089	CAP_2	coord: 453..464
IPR017901	C-CAP/cofactor C-like domain	PROSITE	PS51329	C_CAP_COFACTOR_C	coord: 325..459 score: 40.289

Blast

[Close]

BLAST of TCONS_00011880-protein vs. Swiss-Prot (Human)
Match: CAP1 (Adenylyl cyclase-associated protein 1 OS=Homo sapiens GN=CAP1 PE=1 SV=5)

HSP 1 Score: 384.8 bits (987), Expect = 6.908e-130
Identity = 214/489 (43.76%), Postives = 301/489 (61.55%), Query Frame = 0

Query:    3 ADLEKLVARLEAVTGRLESAASRGGSSGGAAAGNDDPDWYDDYVAFHKENFDS--------FLKATEGLGGDVASIGKLVGNAFSAHKDVVTIAARNGRPSGSDLPTILIPLSNAITAVQEFRDANRKSAQFNHLSALSEAIPFLGWVSISPKPGQYVGQMEESAQFYTNKVLKEFKESDPKQADWARSLIKLLKATTQHVKDNHGTGLQWNKDKPAATGATKAGGAPSAGGAPPPPPPAAAPPPPPPAPAGGSSGASEEVDRSQLFAALNKGGAVTSGLKKVTNDMKTHKNPALRNQ-GPVAAAKASSSLSPRPYSPPKFKKFNAPEV---KKPPKFELQDKKWIIEHQDGNQNLVIDRTNDKQAVYMYKCKNSVLQVQGKINSIVLDNCVKCGVVFTDLISTCEFINCQSVKAQANGYVPTISIDKTDGCQVFLNEKNLDVQIISAKSSEMNICINNEDGDLNEFPLPEQYKTVWDGKKFVTTVMDL 479
            AD++ LV RLE   GRLE+ +       G A   D P       A + + FDS        +LK ++ +GGDV    ++V       + ++  A++  +P+ + L  +L P+S  I  V  FR+ NR S  FNHLSA+SE+I  LGWV+++PKPG YV +M ++A FYTN+VLKE+K+ D K  DW ++ + +      ++K+ H TGL W+K  P A   +     PSAG  PPPPPP   P      P    S + E   RS LFA +N+G ++T  LK V++DMKTHKNPAL+ Q GPV +        P+P+S PK +   +P+    K+P   EL+ KKW +E+Q+   NLVI+ T  KQ  Y+YKC N+ LQ++GKINSI +DNC K G+VF D++   E IN + VK Q  G VPTISI+KTDGC  +L++ +LD +I+SAKSSEMN+ I  E GD NEFP+PEQ+KT+W+G+K VTTV ++
Sbjct:    2 ADMQNLVERLERAVGRLEAVSHTSDMHRGYA---DSPS--KAGAAPYVQAFDSLLAGPVAEYLKISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAENKLSDLLAPISEQIKEVITFREKNRGSKLFNHLSAVSESIQALGWVAMAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHVDWVKAYLSIWTELQAYIKEFHTTGLAWSKTGPVAKELSGLPSGPSAGSCPPPPPPCPPP-----PPVSTISCSYESASRSSLFAQINQGESITHALKHVSDDMKTHKNPALKAQSGPVRSG-------PKPFSAPKPQTSPSPKRATKKEPAVLELEGKKWRVENQENVSNLVIEDTELKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVPTISINKTDGCHAYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPVPEQFKTLWNGQKLVTTVTEI 473

The following BLAST results are available for this feature:

BLAST of TCONS_00011880-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00011880-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CAP1	6.908e-130	43.76	Adenylyl cyclase-associated protein 1 OS=Homo sapi...	[more]

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TCONS_00011880-protein (polypeptide) - C. hemisphaerica