TCONS_00011829-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00011829-protein
Unique Name	TCONS_00011829-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	429

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00011829-protein ID=TCONS_00011829-protein|Name=TCONS_00011829-protein|organism=Clytia hemisphaerica|type=polypeptide|length=429bp
MQQSTLGIEKREHQTGSVHHLDVEPVLFHNKKKQKKDQLLQDRSSVHNDD
DTLRMIDNELAKAMLPDAEVRICGCKEGTFRIISGLILVVLIAVSWTGFT
QFGRSVYDKDFKSPYFTAWFSICFQVSMYPIFMVPLMCQKTPFRIRTFLR
QTAEIFGTRGFCLRSVVVFLLRYSIPFTAINLMWNYFYYRSLKELNAGVV
ATVFASQSTFVYILSLIFLKDKFFILRMSSVLLSLGGIILMGHGEGFDNP
HTLGILFAALAALMAAIYQVAFKRVLGQATSGQVALFVTVIGITNLLFFA
PFIFLLHYVGLEKIDWHLLPWLELAGTAALQLVFHYLVSFGIAFTFPLFI
SIGILISVPFNAVVDAIFRNESFGISKTVAFFLIIVGFMLLLIPIRKVER
LERKWCCGNGHGTEKEEAASGQMLESDGL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_006645	XLOC_006645	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00011829	TCONS_00011829	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SUPERFAMILY	103481	Multidrug resistance efflux transporter EmrE	coord: 169..245

Blast

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BLAST of TCONS_00011829-protein vs. Swiss-Prot (Human)
Match: S35F4 (Solute carrier family 35 member F4 OS=Homo sapiens GN=SLC35F4 PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 1.425e-51
Identity = 114/359 (31.75%), Postives = 198/359 (55.15%), Query Frame = 0

Query:   41 QDRSSVHNDDDTLRMIDNELAKAMLPDAEVRICGCKEGTFRIISGLILVVLIAVSWTGFTQFGRSVYDKDFKSPYFTAWFSICFQVSMYPIF----MVPLMCQKTPFRIRTFLRQTAEIFGTRGFCLRSVVVFLLRYSIPFTAINLMWNYFYYRSLKELNAGVVATVFASQSTFVYILSLIFLKDKFFILRMSSVLLSLGGIILMGHGEGFDNPHTLGILFAALAALMAAIYQVAFKRVLGQATSGQVALFVTVIGITNLLFFAPFIFLLHYVGLEK-IDWHLLPWLELAGTAALQLVFHYLVSFGIAFTFPLFISIGILISVPFNAVVDAIFRNESFGISKTVAFFLIIVGFMLLLIP 394
            Q+RS+   DD T    +N   +  +   + R   C     + I GL++++ ++ SW G TQ  +  Y K+F  P+F  WFS  + +  +P++    +     +++P +     R+ + IFG  G  L+      L+ + PF+ +  + NY Y  +LK+L A  V+ +F     FV++LS I LKD+F  +R+ + ++++ GI++M + + F     +G+ FA  +A  +A+Y+V FK  LG A  G+ A FV+ +G  NL+F +    +L++  +E    +  LPW  L G A L L F+ LV+ G+  T+P+ ISIG ++SVP NA VD + +   F + +  A  +I +GF+L+L+P
Sbjct:  129 QNRSA---DDGTQTHSENSSQENRI---KARCLSCTSMVLKGIWGLLIILSVSSSWVGTTQIVKITY-KNFYCPFFMTWFSTNWNIMFFPVYYSGHLATAQEKQSPMKK---FRECSRIFGEDGLTLK----LFLKRTAPFSILWTLTNYLYLLALKKLTATDVSALFCCNKAFVFLLSWIVLKDRFMGVRIVAAIMAITGIVMMAYADNFHADSIIGVAFAVGSASTSALYKVLFKMFLGSANFGEAAHFVSTLGFFNLIFISFTPVILYFTKVEHWSSFAALPWGCLCGMAGLWLAFNILVNVGVVLTYPILISIGTVLSVPGNAAVDLLKQEVIFNVVRLAATIIICIGFLLMLLP 473

The following BLAST results are available for this feature:

BLAST of TCONS_00011829-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00011829-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S35F4	1.425e-51	31.75	Solute carrier family 35 member F4 OS=Homo sapiens...	[more]

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TCONS_00011829-protein (polypeptide) - C. hemisphaerica