TCONS_00011657-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011657-protein
Unique NameTCONS_00011657-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length397

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011657-protein ID=TCONS_00011657-protein|Name=TCONS_00011657-protein|organism=Clytia hemisphaerica|type=polypeptide|length=397bp
MTSLEIPILQWTCTFYDEKERRWKEGELQLNQTQVVIVFEDKRDKTKKAK
VIKFQNISKITKEKSSYIYPSIVVNLSNCVVWLSSFKIRDEVFNNIEHFW
RISLLDSRASKSEQKDRELLRIAYETQEVLIGASNQLQQQGRQLNSAART
MENMHNDITVAERITGDIESWFGAWRVKGRFENENTMNERMDSPLGSQSI
DYPVLYGKVIQESHKSGQVVFKDNNFELLDEKLAVVYSIPLQQISEIDVH
SPWDITILKRSLGKPLIRIHLTSARMPLILKNLQQSQGPELDLETLPQET
KEVDFIEELGENKNDHATTSSSSSPTSTTSVLTKQKELAMDDAAELSKVL
NKMKFLASDINVEQDAQLKQLDDLTEGVDRATSRFNATNRRIEDTMR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006540XLOC_006540Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011657TCONS_00011657Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.110coord: 329..393
e-value: 5.7E-10
score: 38.7
NoneNo IPR availableGENE3D1.20.5.110coord: 105..169
e-value: 2.3E-9
score: 36.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..333
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 107..169
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 343..393
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 341..395
score: 9.794

Blast
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BLAST of TCONS_00011657-protein vs. Swiss-Prot (Human)
Match: SNP47 (Synaptosomal-associated protein 47 OS=Homo sapiens GN=SNAP47 PE=1 SV=3)

HSP 1 Score: 137.117 bits (344), Expect = 5.021e-36
Identity = 116/419 (27.68%), Postives = 196/419 (46.78%), Query Frame = 0 
Query:    3 SLEIPILQWTCTFYDEKERRWKEGELQLNQTQVVIVFEDKRDKTKKAKV-IKFQNISKITKEKSSYIYPSI-VVNLSNCVVWLSSFKI-RDEVFNNIEHFWRISLLD-----SRASKSEQKDRELLRIAYETQEVLIGASNQLQQQGRQLNSAARTMENMHNDITVAERITGDIES--WFG----AWRVKGRFENENTMNERMDSPLGSQSI--DYPVLYGKVIQESHKSGQVVFKDNNFELLDEKLAVVYSIPLQQISEIDVHSPWDITILKRSLGKPLIRIHLTSARMPLILKNL--QQSQGPELDLETL---------PQETKEVDFIEELG-ENKNDHATTSSSSSPTSTTSVLTKQKELAMDDAAELSKVLNKMKFLASDINVEQDAQLKQLDDLTEGVDRATSRFNATNRRIE 393
            S ++ I  W CT+Y E +RRW  G+L L    +  +     D T +  V     +I +I KE S +I+ SI ++   +   W SS +  R+ VF+ IEHFWR  LL      + AS    +  EL  +   +Q+ L   +  L  QG+QL+S  R ++ M +D+ VA+R+  ++ES  W+      W+     +    ++     P G + I    P +     +   K G++    +  E+ D    +++    + + +I VHSP++I+I +R +GKP +   L SA+MP ++  L  Q S+  EL  + L         P E     +    G   +  H    +     +   + T    L+  D  EL+++L +MK LA +   E + Q + LD +   VDRAT   +  NRR++
Sbjct:   47 SRDVCIHTWPCTYYLEPKRRWVTGQLSLTSLSLRFMT----DSTGEILVSFPLSSIVEIKKEASHFIFSSITILEKGHAKHWFSSLRPSRNVVFSIIEHFWRELLLSQPGAVADASVPRTRGEELTGLMAGSQKRLEDTARVLHHQGQQLDSVMRGLDKMESDLEVADRLLTELESPAWWPFSSKLWKTPPETKPREDVSMTSCEPFGKEGILIKIPAVISHRTESHVKPGRLTVLVSGLEIHDSSSLLMHRFEREDVDDIKVHSPYEISIRQRFIGKPDMAYRLISAKMPEVIPILEVQFSKKMELLEDALVLRSARTSSPAEKSCSVWHAASGLMGRTLHREPPAGDQEGTALHLQTSLPALSEADTQELTQILRRMKGLALEAESELERQDEALDGVAAAVDRATLTIDKHNRRMK 461
The following BLAST results are available for this feature:
BLAST of TCONS_00011657-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNP475.021e-3627.68Synaptosomal-associated protein 47 OS=Homo sapiens... [more]
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