TCONS_00011637-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011637-protein
Unique NameTCONS_00011637-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length316

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011637-protein ID=TCONS_00011637-protein|Name=TCONS_00011637-protein|organism=Clytia hemisphaerica|type=polypeptide|length=316bp
MNPKDNGTSVLYKRPHLMAAATGAARKKHPVKAVLAGGIAGGLEICCTFP
TEYVKTQLQLDSRAEFPKYKGPWDCARTTVKEFGFFGLYRGLSSLLYGSI
PKASIRFSMYEYLRNQMADSNGKLTQVGNLTCGLGAGVAEAILIVCPMET
VKVKFIHDQTQANPKYRGFFHGVYTIVKTDGIRGTYQGLTATILKQGSNQ
AIRFFVYNNMKLWLQDGDNTKEIGMVRTFAIGGLAGAASVFGNTPIDVVK
TRMQGLEANRYKNTWDCVKKTWAEEGALAFYKGTIPRLGRVCFDVAFVFT
LYEQVMKLLDYTWDTN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006530XLOC_006530Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011637TCONS_00011637Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002067Mit_carrier
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002067Mitochondrial carrier proteinPRINTSPR00926MITOCARRIERcoord: 140..158
score: 16.22
coord: 33..46
score: 29.39
coord: 46..60
score: 35.63
coord: 232..254
score: 28.87
IPR023395Mitochondrial carrier domainGENE3D1.50.40.10coord: 24..309
e-value: 9.7E-79
score: 263.6
IPR023395Mitochondrial carrier domainSUPERFAMILY103506Mitochondrial carriercoord: 28..305
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 222..309
e-value: 2.4E-21
score: 75.3
coord: 125..216
e-value: 1.2E-17
score: 63.5
coord: 28..119
e-value: 6.3E-21
score: 74.0
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 28..116
score: 24.573
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 223..308
score: 24.68
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 127..213
score: 26.804

Blast
[Close]
BLAST of TCONS_00011637-protein vs. Swiss-Prot (Human)
Match: TXTP (Tricarboxylate transport protein, mitochondrial OS=Homo sapiens GN=SLC25A1 PE=1 SV=2)

HSP 1 Score: 389.037 bits (998), Expect = 1.585e-136
Identity = 188/295 (63.73%), Postives = 233/295 (78.98%), Query Frame = 0 
Query:   22 TGAARKKHPVKAVLAGGIAGGLEICCTFPTEYVKTQLQLDSRAEFPKYKGPWDCARTTVKEFGFFGLYRGLSSLLYGSIPKASIRFSMYEYLRNQMADSNGKLTQVGNLTCGLGAGVAEAILIVCPMETVKVKFIHDQTQANPKYRGFFHGVYTIVKTDGIRGTYQGLTATILKQGSNQAIRFFVYNNMKLWLQDGDNTKEIGMVRTFAIGGLAGAASVFGNTPIDVVKTRMQGLEANRYKNTWDCVKKTWAEEGALAFYKGTIPRLGRVCFDVAFVFTLYEQVMKLLDYTWDTN 316
            +G A+  HP KA+LAGG+AGG+EIC TFPTEYVKTQLQLD R+  P+Y+G  DC R TV+  G  GLYRGLSSLLYGSIPKA++RF M+E+L N M D+ G+L     L CGLGAGVAEA+++VCPMET+KVKFIHDQT  NPKYRGFFHGV  IV+  G++GTYQGLTAT+LKQGSNQAIRFFV  +++ W +  +  K +  + T   G +AGAASVFGNTP+DV+KTRMQGLEA++Y+NTWDC  +   +EG  AFYKGT+PRLGRVC DVA VF +Y++V+KLL+  W T+
Sbjct:   17 SGKAKLTHPGKAILAGGLAGGIEICITFPTEYVKTQLQLDERSHPPRYRGIGDCVRQTVRSHGVLGLYRGLSSLLYGSIPKAAVRFGMFEFLSNHMRDAQGRLDSTRGLLCGLGAGVAEAVVVVCPMETIKVKFIHDQTSPNPKYRGFFHGVREIVREQGLKGTYQGLTATVLKQGSNQAIRFFVMTSLRNWYRGDNPNKPMNPLITGVFGAIAGAASVFGNTPLDVIKTRMQGLEAHKYRNTWDCGLQILKKEGLKAFYKGTVPRLGRVCLDVAIVFVIYDEVVKLLNKVWKTD 311
The following BLAST results are available for this feature:
BLAST of TCONS_00011637-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TXTP1.585e-13663.73Tricarboxylate transport protein, mitochondrial OS... [more]
back to top