TCONS_00011524-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011524-protein
Unique NameTCONS_00011524-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length199

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011524-protein ID=TCONS_00011524-protein|Name=TCONS_00011524-protein|organism=Clytia hemisphaerica|type=polypeptide|length=199bp
MVSLLFRFSSNLLKLEQDLRIRHHDDVILRKPSRDVTEDEIRSDEFQTLV
DKMIKIMKENYGQGLAATQVGYNLKLIIVEFAEEDYKNSVEYYGQREVEK
RDMRIFPLTVLVNPKMRVLDFDTTLFEEGCLSLPMTTGDVERFKKIEMEG
LDRYGNPVKFVSSGWTARVFQHEMHHLKGLLIIDYFLHKSKNWLRNRLR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006455XLOC_006455Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011524TCONS_00011524Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023635Peptide_deformylase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023635Peptide deformylasePRINTSPR01576PDEFORMYLASEcoord: 128..139
score: 50.46
coord: 51..80
score: 37.59
coord: 140..158
score: 31.87
coord: 159..188
score: 37.59
IPR023635Peptide deformylaseGENE3D3.90.45.10coord: 5..199
e-value: 1.3E-47
score: 160.7
IPR023635Peptide deformylasePIRSFPIRSF004749Pep_defcoord: 8..198
e-value: 9.5E-43
score: 143.9
IPR023635Peptide deformylasePFAMPF01327Pep_deformylasecoord: 20..189
e-value: 1.8E-41
score: 141.3
IPR023635Peptide deformylaseHAMAPMF_00163Pep_deformylasecoord: 17..196
score: 23.14
IPR023635Peptide deformylaseCDDcd00487Pep_deformylasecoord: 21..182
e-value: 1.1793E-48
score: 156.492
IPR023635Peptide deformylaseSUPERFAMILY56420Peptide deformylasecoord: 19..197

Blast
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BLAST of TCONS_00011524-protein vs. Swiss-Prot (Human)
Match: DEFM (Peptide deformylase, mitochondrial OS=Homo sapiens GN=PDF PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.000e-30
Identity = 57/159 (35.85%), Postives = 85/159 (53.46%), Query Frame = 0 
Query:   26 DVILRKPSRDVTEDEIRSDEFQTLVDKMIKIMKENYGQGLAATQVGYNLKLIIVEFAEEDYKNSVEYYGQREVEKRDMRIFPLTVLVNPKMRVLDFDTTLFEEGCLSLPMTTGDVERFKKIEMEGLDRYGNPVKFVSSGWTARVFQHEMHHLKGLLIID 184
            D +LR  +  V   ++   E Q L  +++++M+     GL+A Q+G   +++ +E  E   +        R+   R M  FPL V VNP +RVLD     F EGC S+      V RF+ +++ GLD  G  V + +SGW AR+ QHEM HL+G L ID
Sbjct:   72 DPVLRGVAAPVERAQLGGPELQRLTQRLVQVMRRRRCVGLSAPQLGVPRQVLALELPEALCRECPP----RQRALRQMEPFPLRVFVNPSLRVLDSRLVTFPEGCESVAGFLACVPRFQAVQISGLDPNGEQVVWQASGWAARIIQHEMDHLQGCLFID 226
The following BLAST results are available for this feature:
BLAST of TCONS_00011524-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DEFM1.000e-3035.85Peptide deformylase, mitochondrial OS=Homo sapiens... [more]
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