TCONS_00011406-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011406-protein
Unique NameTCONS_00011406-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length291

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011406-protein ID=TCONS_00011406-protein|Name=TCONS_00011406-protein|organism=Clytia hemisphaerica|type=polypeptide|length=291bp
MSGEEGESKVSTYETYVSTPSERTVLLVKARGETWRDKIGLYEPTEPNFW
RYVFAEFVYTLIFTIIACGCSLNLGEPRSDLHQAVCVGGIVAVLITVSAE
KLGYFNPALSFGLLVAGEIKFVRFFVYAAVQVAGSCAGAGLLYLYTPSNV
RGHLGTLSIHDDLLVGVAFVVELTLTFIVMLVIIAARDPDNQFSLLQSNM
VVGLSVAVAMLMGMPFTGAGVNPIRAFGPAAVTGNLVHEHWVYWVGPLVG
ALCASLSYKYIFKLGEEKPKEKAQPMPTVHMKIKSTSNSSV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006392XLOC_006392Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011406TCONS_00011406Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000425MIP
IPR023271Aquaporin-like
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0016020 membrane
molecular_function GO:0005215 transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 291..291
IPR000425Major intrinsic proteinPRINTSPR00783MINTRINSICPcoord: 241..261
score: 42.87
coord: 123..142
score: 33.23
coord: 86..110
score: 19.61
coord: 51..70
score: 33.51
coord: 171..189
score: 30.22
coord: 203..225
score: 40.54
IPR000425Major intrinsic proteinPFAMPF00230MIPcoord: 46..258
e-value: 2.8E-45
score: 154.7
IPR023271Aquaporin-likeGENE3D1.20.1080.10coord: 40..281
e-value: 3.4E-57
score: 192.9
IPR023271Aquaporin-likeSUPERFAMILY81338Aquaporin-likecoord: 45..270

Blast
[Close]
BLAST of TCONS_00011406-protein vs. Swiss-Prot (Human)
Match: MIP (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.760e-44
Identity = 88/223 (39.46%), Postives = 123/223 (55.16%), Query Frame = 0 
Query:   41 LYEPTEPNFWRYVFAEFVYTLIFTIIACGCSLNLGE-PRSDLHQAVCVGGIVAVLITVSAEKLG-YFNPALSFGLLVAGEIKFVRFFVYAAVQVAGSCAGAGLLYLYTPSNVRGHLGTLSIHDDLLVGVAFVVELTLTFIVMLVIIAARDPDNQFSLLQSNMVVGLSVAVAMLMGMPFTGAGVNPIRAFGPAAVTGNLVHEHWVYWVGPLVGALCASLSYKYI 261
            ++E    +FWR +FAEF  TL +     G SL     P   L  A+  G  +A L+       G + NPA++F  LV  ++  +R F Y A Q+ G+ AGA +LY  TP  VRG+L   ++H  + VG A  VE+ LT   +L I A  D      L    + VG S+A+  L GM +TGAG+NP R+F PA +TGN  + HWVYWVGP++G    SL Y ++
Sbjct:    1 MWELRSASFWRAIFAEFFATLFYVFFGLGSSLRWAPGPLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSVALAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGNFTN-HWVYWVGPIIGGGLGSLLYDFL 222
The following BLAST results are available for this feature:
BLAST of TCONS_00011406-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MIP2.760e-4439.46Lens fiber major intrinsic protein OS=Homo sapiens... [more]
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