TCONS_00011273-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011273-protein
Unique NameTCONS_00011273-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length106

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011273-protein ID=TCONS_00011273-protein|Name=TCONS_00011273-protein|organism=Clytia hemisphaerica|type=polypeptide|length=106bp
MCARSFASVMRDGRRSFQCGLDPHCDLVLLDEATSALDSESEKIVQEALD
HAMEGRTSIVIAHRLSTIQNADVIAVIQGGKIVEMGNHFELLAMKGAYHL
LTEAQM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006319XLOC_006319Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011273TCONS_00011273Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 14..106
e-value: 1.4E-24
score: 86.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 25..105

Blast
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BLAST of TCONS_00011273-protein vs. Swiss-Prot (Human)
Match: MDR1 (Multidrug resistance protein 1 OS=Homo sapiens GN=ABCB1 PE=1 SV=3)

HSP 1 Score: 108.997 bits (271), Expect = 4.748e-29
Identity = 55/83 (66.27%), Postives = 64/83 (77.11%), Query Frame = 0 
Query:   23 PHCDLVLLDEATSALDSESEKIVQEALDHAMEGRTSIVIAHRLSTIQNADVIAVIQGGKIVEMGNHFELLAMKGAYHLLTEAQ 105
            PH  ++LLDEATSALD+ESEK+VQEALD A EGRT IVIAHRLSTIQNAD+I V Q G++ E G H +LLA KG Y  +   Q
Sbjct: 1194 PH--ILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGRVKEHGTHQQLLAQKGIYFSMVSVQ 1274

HSP 2 Score: 98.5969 bits (244), Expect = 2.200e-25
Identity = 51/79 (64.56%), Postives = 60/79 (75.95%), Query Frame = 0 
Query:   27 LVLLDEATSALDSESEKIVQEALDHAMEGRTSIVIAHRLSTIQNADVIAVIQGGKIVEMGNHFELLAMKGAYHLLTEAQ 105
            ++LLDEATSALD+ESE +VQ ALD A +GRT+IVIAHRLST++NADVIA    G IVE GNH EL+  KG Y  L   Q
Sbjct:  551 ILLLDEATSALDTESEAVVQVALDKARKGRTTIVIAHRLSTVRNADVIAGFDDGVIVEKGNHDELMKEKGIYFKLVTMQ 629
The following BLAST results are available for this feature:
BLAST of TCONS_00011273-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MDR14.748e-2966.27Multidrug resistance protein 1 OS=Homo sapiens GN=... [more]
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