TCONS_00011015-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011015-protein
Unique NameTCONS_00011015-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length926

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011015-protein ID=TCONS_00011015-protein|Name=TCONS_00011015-protein|organism=Clytia hemisphaerica|type=polypeptide|length=926bp
YNHPESKRNLEIKTTIKTKGAVYKQTHFFTFLGTGDHPLLGFVMALPLLP
GLNFDRRLGKDKFHKSQCFDYRNDVAVHVAEHKSGIGGELMPGSKAKPRN
SSYPKGSGKQAPAWVAFDRQVLCFDAYFQETVHEKREEKNRIRKCKIYFY
LEDDTIQVIERKVENSGIPQGTLIRRHRIPLPAPQDEEFYTVDHFNVGRE
IKMYSRVYHLTGCDQFTHNFLKKLGVRVKPPLNTPNDPYSSHRHELAESM
QPLRPYEKEDTLRQFLENDRRVLRFYCYWDDTDSMFGDPRECVLHYFLAD
DTVEIREIIQPNSGRDAVPLFLRRAKLXPAPQDEEFYTVDHFNVGREIKM
YSRVYHLTGCDQFTHNFLKKLGVRVKPPLNTPNDPYSSHRHELAESMQPL
RPYEKEDTLRQFLENDRRVLRFYCYWDDTDSMFGDPRECVLHYFLADDTV
EIREIIQPNSGRDAVPLFLRRAKLPKESTEMHQPGKVTKRTVLNVFGPTG
QGGRYILDSLKTGAVHTEYYHDSDLVVGAIINVWGRKFTICGCDEFTQEY
YRSKYGYDNFDAVDYKSQKDGPATRVMPPYNGFGSEEDSLCNCLSLIPKP
PRRDFIKFMEKDRHGLESNVLRFVAKMDTQKPIEVDRRFTISYFLSDDTI
LVFEPPQRNSGIIGGKFLERGRVKKPDGGHYTAQDLFIGGNVQFCKHPFI
LIDADEYAINYMESHADEFPHANPQLVSNKIRRLLTDNASEVRLMLDSAD
RKKTGSMSFETFKKIVKKIGGENISAHEILTIARHFGDFHLRDEDFETLV
ASVQEQLRKVNYENFSLMNDACIYVDERKTGFIPLGELKNISKSFKLPIQ
DHLLEKLLYHTKSNGDGHLDYQHFISFLNWRDQPIISQKYLPGLAFGVET
RKRQGPLDTLNEVAYNKIIDSLGIKI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006174XLOC_006174Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011015TCONS_00011015Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006602Uncharacterised_DM10
IPR010554DUF1126
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006602Uncharacterised domain DM10SMARTSM00676dm10coord: 269..372
e-value: 2.1E-40
score: 150.3
coord: 416..555
e-value: 5.0E-48
score: 175.5
coord: 118..225
e-value: 1.1E-47
score: 174.4
coord: 617..716
e-value: 5.0E-34
score: 129.0
IPR006602Uncharacterised domain DM10PROSITEPS51336DM10coord: 416..555
score: 35.935
IPR006602Uncharacterised domain DM10PROSITEPS51336DM10coord: 269..372
score: 34.275
IPR006602Uncharacterised domain DM10PROSITEPS51336DM10coord: 118..225
score: 34.819
IPR006602Uncharacterised domain DM10PROSITEPS51336DM10coord: 617..716
score: 35.506
NoneNo IPR availableGENE3D1.10.238.10coord: 756..807
e-value: 0.098
score: 12.4
NoneNo IPR availableGENE3D1.10.238.10coord: 808..867
e-value: 2.8E-7
score: 29.9
NoneNo IPR availableGENE3D1.10.238.10coord: 219..755
e-value: 0.0063
score: 15.9
NoneNo IPR availableGENE3D1.10.238.10coord: 868..913
e-value: 0.13
score: 11.6
IPR010554Domain of unknown function DUF1126PFAMPF06565DUF1126coord: 606..707
e-value: 3.3E-30
score: 103.9
coord: 112..217
e-value: 9.4E-33
score: 112.0
coord: 410..547
e-value: 1.5E-35
score: 121.0
coord: 263..364
e-value: 9.6E-35
score: 118.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 813..848
score: 5.28
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 737..772
score: 9.799
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 864..884
score: 6.368
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 745..878

Blast
[Close]
BLAST of TCONS_00011015-protein vs. Swiss-Prot (Human)
Match: EFHC2 (EF-hand domain-containing family member C2 OS=Homo sapiens GN=EFHC2 PE=1 SV=2)

HSP 1 Score: 514.612 bits (1324), Expect = 1.173e-170
Identity = 279/633 (44.08%), Postives = 391/633 (61.77%), Query Frame = 0 
Query:  269 DRRVLRFYCYWD----DTDSMFGDPRECVLHYFLADDTVEIREIIQPNSGRDAVPLFLRRAKLXPAPQDEEFYTVDHFNVGREIKMYSRVYHLTGCDQFTHNFLKKLGVRVKPPLNTPNDPYSSHRHELAESMQPLRPYEKEDTLRQFLENDRRVLRFYCYWDDTDSMFGDPRECVLHYFLADDTVEIREIIQPNSGRDAVPLFLRRAKLPKES-TEMHQPGKVTKRTVLNVFGP--TGQGGRYILDSLKTGAVHTEYYHDSDLVVGAIINVWGRKFTICGCDEFTQEYYRSKYGYDNFDAVDYKSQKDGPAT-RVMPPYNGFGSEEDSLCNCLSLIPKPPRRDFIKFMEKDRHGLESNVLRFVAKMDTQKPIEVDRRFTISYFLSDDTILVFEPPQRNSGIIGGKFLERGRVKKPD--------GGHYTAQDLFIGGNVQFCKHPFILIDADEYAINYMESHADEFPHANPQLVSNKIRRLLTDNASEVRLMLDSADRKKTGSMSFETFKKIVKKIGGENISAHEILTIARHFGDFHLRDEDFETLVASVQEQLRKVNYENFSLMNDACIYVDERKTGFIPLGELKNISKSFKLPIQDHLLEKLLYHTKSNGDGHLDYQHFISFLNWRDQPI 885
            D++VL F  Y +    D        R   ++++  DDT+++ E    NSG        R     P P +++FYTV HFNVG E+  Y R + +  CD FT NFL+K+GV+V PP+  P DPY   R E+ E ++PLRPYE  DTL+QFL+   ++L F+C WDD+ SMFGD RE +LHYFL DDT+EI+E++  +SGRDA+ +FLRR+KLPK     ++QPG++T R VLN +G     Q   Y+ D  K G V  E+Y DSDL +G  INVWGRK  +  CDEFT+ YY+SKYG +NF +V  K     P   R  PPYNGFGSEEDSL NC+ L P P RR+F KFMEKD +G +SN+LRF AK+ T K +++DR F ISY+L DDTI VFEP +RNSGI GG FL+R RVKKP           +  A++L+IG  V    + F L++ADEY +NYME + D++P +N +L   K+++     + E++ +  +AD K T  + + TF+ I+  +   N++  E +TIARH+        D + L+A   E+ +K  +ENF     +C+Y D  K   +P  ++K + KS +LP+ D LLE LL   + + +  +DY+ F S LNWR  P+
Sbjct:   75 DKQVLSFDAYLEEEVLDKSQTNYRIRYYKIYFYPEDDTIQVNEPEVKNSGLLQGTSIRRHRITLPPPDEDQFYTVYHFNVGTEVVFYGRTFKIYDCDAFTRNFLRKIGVKVNPPVQCPEDPYMKIRREVVEHVEPLRPYESLDTLKQFLQYHGKILCFFCLWDDSVSMFGDRRELILHYFLCDDTIEIKELLPHSSGRDALKMFLRRSKLPKNCPPRVYQPGQITDRAVLNSYGDFIKNQADGYLFDRYKLGKVDQEFYKDSDLSLGVTINVWGRKVLLYDCDEFTKSYYKSKYGIENFTSVSCKPPSPPPKIERKFPPYNGFGSEEDSLRNCIDLKPTPHRRNFKKFMEKDSYGSKSNILRFFAKLVTDKCVDLDRMFVISYYLGDDTISVFEPIERNSGIAGGMFLKRSRVKKPGQEVFKSELSEYIKAEELYIGVTVNVNGYLFRLLNADEYTLNYMEQNTDKYPFSNLKLALQKLKQ-EEGKSRELKQVFKAADSKHTNMVDYNTFRDILMSLTVGNLAEQEFVTIARHYRVPEGTCSDMDFLIALAHEKFKKNMFENFDTFIYSCVYEDREKKNVLPTKDIKRLCKSSRLPLSDDLLESLLSRFE-DSEKQIDYKSFFSALNWRKNPV 705

HSP 2 Score: 383.645 bits (984), Expect = 1.912e-120
Identity = 234/616 (37.99%), Postives = 329/616 (53.41%), Query Frame = 0 
Query:   44 MALPLLPGLNFDRRLGKDKFHKSQCFDYRNDVAVHVAEHKSGIGGELMPGSKAKPRNSSYPKGSGKQAPAWVAFDRQVLCFDAYFQETVHEKREEKNRIRKCKIYFYLEDDTIQVIERKVENSGIPQGTLIRRHRIPLPAPQDEEFYTVDHFNVGREIKMYSRVYHLTGCDQFTHNFLKKLGVRVKPPLNTPNDPYSSHRHELAESMQPLRPYEKEDTLRQFLENDRRVLRFYCYWDDTDSMFGDPRECVLHYFLADDTVEIREIIQPNSGRDAVPLFLRRAKLXP---------------------------------------APQDEEFYTVDHFNVGREIKMYSRVYHLTGCDQFTHNFLK-KLGV------------------RVKPPLNTPNDPYSSHRHELAESMQPLRPYEKEDTLRQFLEND-----RRVLRFYCYWDDTDSMFGDPRECVLHYFLADDTVEIREIIQPNSGRDAVPLFLRRAKLPKESTEMHQPGKVTKRTVLNVFGPTGQGGRYILDSLKTGAVHTEYYHDSDLVVGAIINVWGRKFTICGCDEFTQEYYRS---KYGYDNFD-AVDYKSQKDGPATRVMPPYNGFGSEEDSLCN 592
            MALPLLPG +F+R +GK+KFHKSQ + + N+V + V++ K GIGGE + G K KP+ S YPKG G   P+WVAFD+QVL FDAY +E V +K +   RIR  KIYFY EDDTIQV E +V+NSG+ QGT IRRHRI LP P +++FYTV HFNVG E+  Y R + +  CD FT NFL+K+GV+V PP+  P DPY   R E+ E ++PLRPYE  DTL+QFL+   ++L F+C WDD+ SMFGD RE +LHYFL DDT+EI+E++  +SGRDA+ +FLRR+KL                                            D+EFY     ++G  I ++ R   L  CD+FT ++ K K G+                  R  PP N     + S    L   +  L+P       ++F+E D       +LRF+     TD      R  V+ Y+L DDT+ + E I+ NSG  A  +FL+R+++ K       PG+   ++ L                       +EY    +L +G  +NV G  F +   DE+T  Y      KY + N   A+    Q++G +  +   +    S+  ++ +
Sbjct:    1 MALPLLPGNSFNRNVGKEKFHKSQHWGFCNNVMMLVSDEKPGIGGEPLLGQKIKPKCSIYPKGDGSDVPSWVAFDKQVLSFDAYLEEEVLDKSQTNYRIRYYKIYFYPEDDTIQVNEPEVKNSGLLQGTSIRRHRITLPPPDEDQFYTVYHFNVGTEVVFYGRTFKIYDCDAFTRNFLRKIGVKVNPPVQCPEDPYMKIRREVVEHVEPLRPYESLDTLKQFLQYHGKILCFFCLWDDSVSMFGDRRELILHYFLCDDTIEIKELLPHSSGRDALKMFLRRSKLPKNCPPRVYQPGQITDRAVLNSYGDFIKNQADGYLFDRYKLGKVDQEFYKDSDLSLGVTINVWGRKVLLYDCDEFTKSYYKSKYGIENFTSVSCKPPSPPPKIERKFPPYNG----FGSEEDSLRNCID-LKPTPHRRNFKKFMEKDSYGSKSNILRFFAKL-VTDKCVDLDRMFVISYYLGDDTISVFEPIERNSGI-AGGMFLKRSRVKK-------PGQEVFKSEL-----------------------SEYIKAEELYIGVTVNVNGYLFRLLNADEYTLNYMEQNTDKYPFSNLKLALQKLKQEEGKSRELKQVFKAADSKHTNMVD 579
The following BLAST results are available for this feature:
BLAST of TCONS_00011015-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EFHC21.173e-17044.08EF-hand domain-containing family member C2 OS=Homo... [more]
back to top