TCONS_00009930-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009930-protein
Unique NameTCONS_00009930-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length224

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009930-protein ID=TCONS_00009930-protein|Name=TCONS_00009930-protein|organism=Clytia hemisphaerica|type=polypeptide|length=224bp
MVLSTLRGVLTKRPLLRSIVTVTSLFAASDLCCQLFENHGNIKYKFDWER
LRKMATIGLIYYGPMYYYYYGFLDRKFPGKNPRTVLVKILFDQFIFAVPS
QFFFYCIAGKLERKNNSEIIEEIKLKYIPTYVTSTIFWPAAQLVNFSLVP
PTHRILFVSSANFVWLNILSYIKNRPNLPAVLERVQNWTTMDVKKELVVE
HLESENNNDLDLEEDPESEKKKTE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005570XLOC_005570Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009930TCONS_00009930Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 111..170
e-value: 9.7E-19
score: 67.2

Blast
[Close]
BLAST of TCONS_00009930-protein vs. Swiss-Prot (Human)
Match: M17L2 (Mpv17-like protein 2 OS=Homo sapiens GN=MPV17L2 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 2.916e-20
Identity = 54/168 (32.14%), Postives = 79/168 (47.02%), Query Frame = 0 
Query:   15 LLRSIVTVTSLFAASDLCCQLFENHGNIKYKFDWERLRKMATIGLIYYGPMYYYYYGFLDRKFPGKNPRT---VLVKILFDQFIFAVPSQFFFYCIAGKLERKNNSEIIEEIKLKYIPTYVTSTIFWPAAQLVNFSLVPPTHRILFVSSANFVWLNILSYIKNRPNLP 179
            L+ + +   +L AA D   Q +E        FD  R   M  +G    GP  +Y+Y  LDR FP    R    VL K+L DQ + +     +++   G LE +   E  +E++ K+   Y      WPAAQ VNF  VPP  R+ +++     W   LSY+K R  +P
Sbjct:   26 LVTNTLGCGALMAAGDGVRQSWEIRARPGQVFDPRRSASMFAVG-CSMGPFLHYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWYFLGLGCLEGQTVGESCQELREKFWEFYKADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGWDTYLSYLKYRSPVP 192
The following BLAST results are available for this feature:
BLAST of TCONS_00009930-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
M17L22.916e-2032.14Mpv17-like protein 2 OS=Homo sapiens GN=MPV17L2 PE... [more]
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