TCONS_00009019-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00009019-protein
Unique Name	TCONS_00009019-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	649

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00009019-protein ID=TCONS_00009019-protein|Name=TCONS_00009019-protein|organism=Clytia hemisphaerica|type=polypeptide|length=649bp
MALKWCCFLLLLTTETLIQCKEVDSNGTGNGTKEGLIKEDPIAEVLEHDT
MAFFAVLLMLFFCVLVIAFLLNKKCHYLPEALAVMILGCLVAAIIKYVIG
NIPGVNVDSWEKVESFHPDLFFLVLLPPIIFESGYTLQKGDFFSNIGAIL
TYALLGTTISAVIVGFTMYGLGLAGLAHPLKLIEAFSFGSLISATDPVST
LALFSSMNADQDLYAIVFGESVLNDAVSIILTQTLISAAVQMDQGSVDFN
SLALHSIGKFCLMFFVSAIIGTIFGLLCALVLKHINLRVHPSLECVTMFI
FAYMPYGLSEGLELSGIMAILLCGITMSHYAHFNLSPMGQIAVQHVFRVL
ALVAETMVFLYLGMAVLNGTHQFEIRFISWSMLACLVARAVVVYPLSIFF
YFCRQKESRISFKILFLVWFSGLRGAVAFAQSLHLPLANQVSRNLIMTTT
LAIVVFTNVVLGGMTLPLIKYFNVQSKRPKSGISKSLGMGRITMPAEASN
QSRIYQQRRRKSPMSIIRGWRRFDKKYLMPFFIRTNDSKDYRSAVTHMID
QWAENEERAAHQFLNSSAELDENRHLVINRTRKNIVRPVRKFFRTLDGTK
TEDEFTENEGDTPAKEPDRVRFSSVNEAGEQRNGYGSINHTNDDTETLL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_005043	XLOC_005043	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00009019	TCONS_00009019	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004709	NaH_exchanger
IPR006153	Cation/H_exchanger

Vocabulary: **Biological Process**
Term	Definition
GO:0006885	regulation of pH
GO:0006814	sodium ion transport
GO:0055085	transmembrane transport
GO:0006812	cation transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0015385	sodium:proton antiporter activity
GO:0015299	solute:proton antiporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006812	cation transport
biological_process	GO:0006885	regulation of pH
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015385	sodium:proton antiporter activity
molecular_function	GO:0015299	solute:proton antiporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004709	Na+/H+ exchanger	PRINTS	PR01084	NAHEXCHNGR	coord: 120..131 score: 72.02 coord: 189..199 score: 70.84 coord: 149..157 score: 62.59 coord: 134..148 score: 49.05
IPR004709	Na+/H+ exchanger	TIGRFAM	TIGR00840	TIGR00840	coord: 52..551 e-value: 1.9E-107 score: 357.9
IPR006153	Cation/H+ exchanger	PFAM	PF00999	Na_H_Exchanger	coord: 60..469 e-value: 3.0E-60 score: 203.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 602..649

Blast

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BLAST of TCONS_00009019-protein vs. Swiss-Prot (Human)
Match: SL9A8 (Sodium/hydrogen exchanger 8 OS=Homo sapiens GN=SLC9A8 PE=1 SV=4)

HSP 1 Score: 414.075 bits (1063), Expect = 2.026e-137
Identity = 234/541 (43.25%), Postives = 339/541 (62.66%), Query Frame = 0

Query:   51 MAFFAVLLMLFFCVLVIAFLLNKKCHYLPEALAVMILGCLVAAIIKYVIGNIPGVNVDSWEKVESFHPDLFFLVLLPPIIFESGYTLQKGDFFSNIGAILTYALLGTTISAVIVGFTMYGLGLAGLAHPLKLIEAFSFGSLISATDPVSTLALFSSMNADQDLYAIVFGESVLNDAVSIILTQTLISAAVQMDQGSVDFNSLALHSIGKFCLMFFVSAIIGTIFGLLCALVLKHINLRVHPSLECVTMFIFAYMPYGLSEGLELSGIMAILLCGITMSHYAHFNLSPMGQIAVQHVFRVLALVAETMVFLYLGMAVLNGTHQFEIRFISWSMLACLVARAVVVYPLSIFFYFCRQKESRISFKILFLVWFSGLRGAVAFAQSLHLPLANQVSRNLIMTTTLAIVVFTNVVLGGMTLPLIKYFNVQS----KRPKSGI--SKSLGMGRITMPAEASNQSRIYQQR------RRKSPMSIIRGWRRFDKKYLMPFFIRTNDSKDY---RSAVTHMIDQWAENEERAAHQFLNSSAELDENRHL 576
            M  F  LL+L  C++++  L+  + H+LPE++AV+ LG L+ A+IK     I    + +W++ E F P++FFL+LLPPIIFESGY+L KG+FF NIG+I  +A+ GT ISA +VG  +Y LG A +   L + ++F+FGSLISA DPV+T+A+F++++ D  L  +VFGES+LNDAVSI+LT T      + +   V      L ++  F  MFF SA +GT+ GL+ ALVLKHI+LR  PSLE   M IFAY+PYGL+EG+ LSGIMAIL  GI MSHY H NLSP+ QI +Q   R +A + ET VF +LG+++ +  H+FEI F+ W ++  L  RAV ++PLS    F R  + +I+ K++F++WFSGLRGA+ +A SLHL L     R LI TTT+ IV+FT ++LGG T+PLI+  +++     +R K  +  SK+  MG      E+ + S + ++       RR+     ++G+   D KYL PFF R    +D    R  +  + ++W E   +       S +E DE   L
Sbjct:   60 MTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKI----IEFKKLANWKEEEMFRPNMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFAVFGTAISAFVVGGGIYFLGQADVISKLNMTDSFAFGSLISAVDPVATIAIFNALHVDPVLNMLVFGESILNDAVSIVLTNT-AEGLTRKNMSDVSGWQTFLQALDYFLKMFFGSAALGTLTGLISALVLKHIDLRKTPSLEFGMMIIFAYLPYGLAEGISLSGIMAILFSGIVMSHYTHHNLSPVTQILMQQTLRTVAFLCETCVFAFLGLSIFSFPHKFEISFVIWCIVLVLFGRAVNIFPLSYLLNFFR--DHKITPKMMFIMWFSGLRGAIPYALSLHLDLEPMEKRQLIGTTTIVIVLFTILLLGGSTMPLIRLMDIEDAKAHRRNKKDVNLSKTEKMGNT---VESEHLSELTEEEYEAHYIRRQD----LKGFVWLDAKYLNPFFTRRLTQEDLHHGRIQMKTLTNKWYEEVRQGP-----SGSEDDEQELL 581

The following BLAST results are available for this feature:

BLAST of TCONS_00009019-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00009019-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SL9A8	2.026e-137	43.25	Sodium/hydrogen exchanger 8 OS=Homo sapiens GN=SLC...	[more]

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TCONS_00009019-protein (polypeptide) - C. hemisphaerica