TCONS_00008858-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008858-protein
Unique NameTCONS_00008858-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length316

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008858-protein ID=TCONS_00008858-protein|Name=TCONS_00008858-protein|organism=Clytia hemisphaerica|type=polypeptide|length=316bp
TKSNKCQFFMNRGAEKKEKDNWLEKTPKSERIQENQEMAQTSPIVQPEVA
SKDIRQADEGTGICGLFLTCISILLFIATFPMSLLFCLKIVQEYERAVIF
RTGRLVKGGARGPGIFFILPCIDNYIKIDLRVVAFDVPPQEILTRDSVTI
QVDAVTYFRISDPILSVCNVENAHRSTQLLAQTTLRNELGTKNLSEVLQG
RDTISHSIQQILDAATDPWGVKVERVEIKDVRLPQMLQRAMAAEAEASRE
AKAKVIAAEGEMNAARALKEASDVICESPQALQLRYLQTLQTISAEKNST
IIFPLPIDMIQRKLGI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004970XLOC_004970Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008858TCONS_00008858Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001972Stomatin_fam
IPR001107Band_7
IPR018080Band_7/stomatin-like_CS
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001972Stomatin familyPRINTSPR00721STOMATINcoord: 197..220
score: 45.24
coord: 265..288
score: 66.07
coord: 177..194
score: 68.25
coord: 93..115
score: 62.42
coord: 240..261
score: 77.27
coord: 221..239
score: 69.17
coord: 142..163
score: 60.06
IPR001107Band 7 domainSMARTSM00244PHB_4coord: 86..245
e-value: 7.8E-65
score: 231.4
IPR001107Band 7 domainPFAMPF01145Band_7coord: 90..261
e-value: 1.3E-31
score: 109.9
IPR001107Band 7 domainSUPERFAMILY117892Band 7/SPFH domaincoord: 119..251
IPR018080Band 7/stomatin-like, conserved sitePROSITEPS01270BAND_7coord: 201..229

Blast
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BLAST of TCONS_00008858-protein vs. Swiss-Prot (Human)
Match: STOM (Erythrocyte band 7 integral membrane protein OS=Homo sapiens GN=STOM PE=1 SV=3)

HSP 1 Score: 344.739 bits (883), Expect = 2.498e-119
Identity = 173/257 (67.32%), Postives = 215/257 (83.66%), Query Frame = 0 
Query:   59 EGTGICGLFLTCISILLFIATFPMSLLFCLKIVQEYERAVIFRTGRLVKGGARGPGIFFILPCIDNYIKIDLRVVAFDVPPQEILTRDSVTIQVDAVTYFRISDPILSVCNVENAHRSTQLLAQTTLRNELGTKNLSEVLQGRDTISHSIQQILDAATDPWGVKVERVEIKDVRLPQMLQRAMAAEAEASREAKAKVIAAEGEMNAARALKEASDVICESPQALQLRYLQTLQTISAEKNSTIIFPLPIDMIQRKLG 315
            +G G CG  L   S L  + TFP+S+  C+KI++EYERA+IFR GR+++GGA+GPG+FFILPC D++IK+D+R ++FD+PPQEILT+DSVTI VD V Y+R+ +  L+V N+ NA  +T+LLAQTTLRN LGTKNLS++L  R+ I+H++Q  LD ATD WG+KVERVEIKDV+LP  LQRAMAAEAEASREA+AKVIAAEGEMNA+RALKEAS VI ESP ALQLRYLQTL TI+AEKNSTI+FPLPIDM+Q  +G
Sbjct:   25 KGLGPCGWILVAFSFLFTVITFPISIWMCIKIIKEYERAIIFRLGRILQGGAKGPGLFFILPCTDSFIKVDMRTISFDIPPQEILTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTTLRNVLGTKNLSQILSDREEIAHNMQSTLDDATDAWGIKVERVEIKDVKLPVQLQRAMAAEAEASREARAKVIAAEGEMNASRALKEASMVITESPAALQLRYLQTLTTIAAEKNSTIVFPLPIDMLQGIIG 281
The following BLAST results are available for this feature:
BLAST of TCONS_00008858-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STOM2.498e-11967.32Erythrocyte band 7 integral membrane protein OS=Ho... [more]
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