TCONS_00008590-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008590-protein
Unique NameTCONS_00008590-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length270

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008590-protein ID=TCONS_00008590-protein|Name=TCONS_00008590-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
MSHNDIIQKAEDLADQVLRHSKHVLPHLARFCLVATFFEDGIRMWFQWTE
QRDYIDHTWNCGAFIGTLFVLINFLGQLSGCFMVLGRVKVEIAVGVLFGT
ILLQTLAYQVFTDVKFFLRSLALSGGLILLLAECRQEARTVFAGVPTLDS
HNKPKTYMQLTGRVLLLLMYLTLLKFDMSFFHIVFNLFGTILIMLVTVGY
KTKLSALVMVVFLMGINVYENAFWMVPQWKAMRDFLKYDFFQTMSVIGGL
LLVVAFGPGGASMDEAKKRW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004805XLOC_004805Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008590TCONS_00008590Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002995Surf4
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002995Surfeit locus 4PFAMPF02077SURF4coord: 4..270
e-value: 6.4E-112
score: 373.4
IPR002995Surfeit locus 4PROSITEPS01339SURF4coord: 237..251

Blast
[Close]
BLAST of TCONS_00008590-protein vs. Swiss-Prot (Human)
Match: SURF4 (Surfeit locus protein 4 OS=Homo sapiens GN=SURF4 PE=1 SV=3)

HSP 1 Score: 337.035 bits (863), Expect = 2.538e-117
Identity = 172/270 (63.70%), Postives = 209/270 (77.41%), Query Frame = 0 
Query:    1 MSHNDIIQKAEDLADQVLRHSKHVLPHLARFCLVATFFEDGIRMWFQWTEQRDYIDHTWNCGAFIGTLFVLINFLGQLSGCFMVLGRVKVEIAVGVLFGTILLQTLAYQVFTDVKFFLRSLALSGGLILLLAECRQEARTVFAGVPTLDSHNKPKTYMQLTGRVLLLLMYLTLLKFDMSFFHIVFNLFGTILIMLVTVGYKTKLSALVMVVFLMGINVYENAFWMVPQWKAMRDFLKYDFFQTMSVIGGLLLVVAFGPGGASMDEAKKRW 270
            M  ND++  AED ADQ LR +K  LPH+AR CL++TF EDGIRMWFQW+EQRDYID TWNCG  + + FV +N LGQL+GC +VL R  V+ A   LFG I LQT+AY +  D+KF +R+LAL GGL+LLLAE R E +++FAGVPT+   + PK YMQL GRVLL+LM++TLL FD SFF IV N+ GT L++LV +G+KTKL+AL +VV+L  INVY NAFW +P +K M DFLKYDFFQTMSVIGGLLLVVA GPGG SMDE KK W
Sbjct:    1 MGQNDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGYLLASSFVFLNLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLALGGGLLLLLAESRSEGKSMFAGVPTM-RESSPKQYMQLGGRVLLVLMFMTLLHFDASFFSIVQNIVGTALMILVAIGFKTKLAALTLVVWLFAINVYFNAFWTIPVYKPMHDFLKYDFFQTMSVIGGLLLVVALGPGGVSMDEKKKEW 269
The following BLAST results are available for this feature:
BLAST of TCONS_00008590-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SURF42.538e-11763.70Surfeit locus protein 4 OS=Homo sapiens GN=SURF4 P... [more]
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