TCONS_00008570-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00008570-protein
Unique Name	TCONS_00008570-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1156

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00008570-protein ID=TCONS_00008570-protein|Name=TCONS_00008570-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1156bp
MTSVWKKFSRVGKKAAKFEFIAQLQSVTIECKKEKKWVPSKLVVLWQRGA
HRRRYSRPFDFAPGIAKPYRGVMVWADPEELDMTCTLYKDEKGDSQFETK
EWTFLVLDESSGRRKAIAQATIDMAKYFSIEPSCKQITIKMKPGSTKVKT
AQLDIALSCIFLREGKATDEDMLSVASMMSLGDIDNYDDESQTINPVMKR
VAHLTGSTNDLGSSRGISSSTNSLQRLEPEPASQTSSSRTSPNRSPSAMK
KPTKEKVVSSKTVDKDSKKSRIDEDLLTWCQKITSSYRGVKVTNMTTSWR
NGMAFCAILNHFHPELVDFPSLSPHNIKQNNKLAFDGFEYLGITKILDPN
DMVHAATPDKLSVMTYLHQIKHYFENSYSKNSINLLMSQYNFMTGTDDDL
LKSVKKASPKPEKKSKSLRKSFRRKKEKPTPASQEAGEIDSITDAHEINA
ILNQLREDERQNELKRINESIEKVEKKPPVHRAPPPPKFAARSQQNDSID
EDEMLNSIIEANNVEETATTEVTPDEKDSVAIDEQEQQPPSATPTTSTTT
VTTSDDVHLRLGETDIDAVDDDIGESQVETSVPKPSSMEEASPTNTDEPQ
PTADSPSTTTSTTSQQQEEDETPSTTQSSTTNNAEQQQQQPRIRRKLPLT
RQLSGEDADKEIDDEKQDSVKPVSETEEVQDEQKEAGDEVVENQQNLDED
DTRNKQDMIQERARQLILEARKKAEQNKDAEPSASDDPDVRAKKFSEMRR
QREKVLQHKLNQQEDRKQLLRSQANQLLLDAKMRGSLHNIDRSANSPSNE
FPPSAFGGEDMEEGGMSPETQQRMRNNDFRKNPFTLVKKSNKQLKQITPK
NYLKEEPDPVDSEPKLPTKTSPSKAAITYAESRKVEFDSFESGFQYKPKR
DVAAEIAAELARLKEEEDEAQRQFDRTQAEKRGGAQQYEGGVQDEEGERH
VEECIPSEEEEEVEEGHVPVDDYFYELENFNLKSADEYYHNELAQLEQET
KALDLVAQKLELELRKAMDAGDQEGEEDLLQEWFNLVNKKNEIIRRQNEI
ALLAKGDDLERRCEIVNRELRVLSQMNEWEKTEEIRLREDNLLSQLVTLV
NQRNRLVQIEDTQLQQSVHDEEHVQTVLQQQTSFNQKNTTVGNVVGWVKG
FKSKFW

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_004797	XLOC_004797	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00008570	TCONS_00008570	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001715	CH-domain
IPR022735	DUF3585
IPR019448	NT-C2

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 899..930
None	No IPR available	COILS	Coil	Coil	coord: 993..1013
None	No IPR available	COILS	Coil	Coil	coord: 753..780
None	No IPR available	COILS	Coil	Coil	coord: 457..477
None	No IPR available	SMART	SM01203	DUF3585_4	coord: 983..1126 e-value: 1.7E-36 score: 137.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 403..441
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 469..767
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 789..875
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 914..949
IPR001715	Calponin homology domain	SMART	SM00033	ch_5	coord: 272..370 e-value: 1.4E-15 score: 67.7
IPR001715	Calponin homology domain	PFAM	PF00307	CH	coord: 273..375 e-value: 2.4E-23 score: 82.3
IPR001715	Calponin homology domain	GENE3D	1.10.418.10		coord: 250..378 e-value: 2.6E-26 score: 91.5
IPR001715	Calponin homology domain	PROSITE	PS50021	CH	coord: 270..372 score: 13.869
IPR001715	Calponin homology domain	CDD	cd00014	CH	coord: 273..374 e-value: 1.49618E-18 score: 82.3587
IPR001715	Calponin homology domain	SUPERFAMILY	47576	Calponin-homology domain, CH-domain	coord: 268..374
IPR022735	Domain of unknown function DUF3585	PFAM	PF12130	DUF3585	coord: 990..1122 e-value: 4.5E-29 score: 101.2
IPR019448	EEIG1/EHBP1 N-terminal domain	PFAM	PF10358	NT-C2	coord: 13..166 e-value: 5.2E-15 score: 55.3

Blast

[Close]

BLAST of TCONS_00008570-protein vs. Swiss-Prot (Human)
Match: EHBP1 (EH domain-binding protein 1 OS=Homo sapiens GN=EHBP1 PE=1 SV=3)

HSP 1 Score: 204.527 bits (519), Expect = 1.885e-53
Identity = 100/189 (52.91%), Postives = 134/189 (70.90%), Query Frame = 0

Query:    1 MTSVWKKFSRVGKKAAKFEFIAQLQSVTIECKKEKKWVPSKLVVLWQRGAHRRRYSRPFDFAPGIAKPYRGVMVWADPEELDMTCTLYKDEKGDSQFETKEWTFLVLDES-SGRRKAIAQATIDMAKYFSIEPSCKQITIKMKPGSTKVKTAQLDIALSCIFLREGKATDEDMLSVASMMSL--GDIDN 186
            M SVWK+  RVGK A+KF+F+A  Q + +EC K  KW P KLVV+W R + RR+ S+   + PGI  PYRGV+VW  PE +++T TL+KD   + +FE KEWTF++ +ES SGRRKA+A ++I+M +Y S  P+   + +K KP S KV +A L  +LSCIFLREGKATDEDM S+AS+MS+   DI N
Sbjct:    1 MASVWKRLQRVGKHASKFQFVASYQELMVECTK--KWQPDKLVVVWTRRS-RRKSSKAHSWQPGIKNPYRGVVVWPVPENIEITVTLFKDPHAE-EFEDKEWTFVIENESPSGRRKALATSSINMKQYASPMPTQTDVKLKFKPLSKKVVSAALQFSLSCIFLREGKATDEDMQSLASLMSMKQADIGN 185

HSP 2 Score: 162.155 bits (409), Expect = 2.634e-40
Identity = 62/107 (57.94%), Postives = 89/107 (83.18%), Query Frame = 0

Query:  268 KKSRIDEDLLTWCQKITSSYRGVKVTNMTTSWRNGMAFCAILNHFHPELVDFPSLSPHNIKQNNKLAFDGFEYLGITKILDPNDMVHAATPDKLSVMTYLHQIKHYF 374
            +K    + LL WC+++T +YRGVK+TN TTSWRNG++FCAIL+HF P+L+D+ SL+P +IK+NNK A+DGF  +GI+++L+P+DMV  A PDKL+VMTYL+QI+ +F
Sbjct:  441 RKPNASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNPQDIKENNKKAYDGFASIGISRLLEPSDMVLLAIPDKLTVMTYLYQIRAHF 547

HSP 3 Score: 132.494 bits (332), Expect = 4.315e-31
Identity = 73/156 (46.79%), Postives = 102/156 (65.38%), Query Frame = 0

Query:  976 ELENFNLKSADEYYHNELAQLEQETKALDLVAQKLELELRKAMDAG-DQEGEEDLLQEWFNLVNKKNEIIRRQNEIALLAKGDDLERRCEIVNRELRVLSQMNEWEKTEEIRLREDNLLSQLVTLVNQRNRLVQIEDTQLQQSVHDEEHVQTVLQQ 1130
            E+ N   K   +Y   ELA LE E K +D  A  +E  LR  MD G + E EE ++QEWF LVNKKN +IRR N+++LL K  DLERR E++NRELR +  + +W+KTE  + RE  LL +LV LVN+R+ LV+  D Q +Q+  ++EH++  L+Q
Sbjct: 1061 EVLNKGFKDTSQYVVGELAALENEQKQIDTRAALVEKRLRYLMDTGRNTEEEEAMMQEWFMLVNKKNALIRRMNQLSLLEKEHDLERRYELLNRELRAMLAIEDWQKTEAQKRREQLLLDELVALVNKRDALVRDLDAQEKQAEEEDEHLERTLEQ 1216

The following BLAST results are available for this feature:

BLAST of TCONS_00008570-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00008570-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
EHBP1	1.885e-53	52.91	EH domain-binding protein 1 OS=Homo sapiens GN=EHB...	[more]

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TCONS_00008570-protein (polypeptide) - C. hemisphaerica