TCONS_00008567-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008567-protein
Unique NameTCONS_00008567-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length188

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008567-protein ID=TCONS_00008567-protein|Name=TCONS_00008567-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
MKTLQPTLSHAEVEFLAEHSDVTILPNFQESKLFFLTGDFGPFNPGMPID
VPAWLAVTLKQQNKCKIHCPDWLDVDRLQDFKDAENNEDVFTKPPVPHYK
EIASMLLRCGPGDIPKADEVRTLIKDIWDIRMAKLRKSIDQMVIAQEPHA
QIDNLTVMEMNFVRTILLPTLNEIHNMRCYVTQLPASS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004795XLOC_004795Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008567TCONS_00008567Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007257GINS_Psf2
IPR021151GINS_A
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006260 DNA replication
cellular_component GO:0005634 nucleus
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007257DNA replication complex GINS protein Psf2PIRSFPIRSF028998GINS_PSF2coord: 1..184
e-value: 1.5E-53
score: 179.2
IPR021151GINS subunit, domain APFAMPF05916Sld5coord: 50..159
e-value: 1.0E-17
score: 64.5
IPR021151GINS subunit, domain ASUPERFAMILY158573GINS helical bundle-likecoord: 70..178
NoneNo IPR availableCDDcd11712GINS_A_psf2coord: 62..179
e-value: 1.59141E-48
score: 155.075
NoneNo IPR availableSUPERFAMILY160059PriA/YqbF domaincoord: 8..67

Blast
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BLAST of TCONS_00008567-protein vs. Swiss-Prot (Human)
Match: PSF2 (DNA replication complex GINS protein PSF2 OS=Homo sapiens GN=GINS2 PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 4.344e-64
Identity = 88/177 (49.72%), Postives = 124/177 (70.06%), Query Frame = 0 
Query:   11 AEVEFLAEHSDVTILPNFQESKLFFLTGDFGPFNPGMPIDVPAWLAVTLKQQNKCKIHCPDWLDVDRLQDFKDAENNEDVFTKPPVPHYKEIASMLLRCGPGDIPKADEVRTLIKDIWDIRMAKLRKSIDQMVIAQEPHAQIDNLTVMEMNFVRTILLPTLNEIHNMRCYVTQLPAS 187
            AEVEFLAE   VTI+PNF   K++ + GD GPFNPG+P++VP WLA+ LKQ+ KC++  P+W+DV++L+  +D E  E+ FT  P P+Y E+  +LL     +IPKADE+RTL+KD+WD R+AKLR S D  V  QE HA++DNLT+ME+N   T L   LN ++ +R  +  L ++
Sbjct:    4 AEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDMWDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLRTNLQPLEST 180
The following BLAST results are available for this feature:
BLAST of TCONS_00008567-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PSF24.344e-6449.72DNA replication complex GINS protein PSF2 OS=Homo ... [more]
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