TCONS_00008508-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008508-protein
Unique NameTCONS_00008508-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length441

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008508-protein ID=TCONS_00008508-protein|Name=TCONS_00008508-protein|organism=Clytia hemisphaerica|type=polypeptide|length=441bp
SLLSTVKHEIYHALGFSVGLFAFYRDKNGKPLSNRLKNGLPEYNQETNLY
QWSDRVLKTIIRTDWAVSGGTVKHPVQLIVTPTVQREVRKHFACDDLEGA
ELENQGGEGTASTHWEKRLFENEAMTGTYTQHPVFSRITLALMEDTEWYK
ANYAMAEDLDWGKNLGCLFVKNNCRAWIANSIEQKLHTAPFCATLKQSPL
HMRCTHSKLSLALCNLVKYSSTLPRDFQYFDKLGHISVKDIATYGGAVEL
ADFCPFYQKFTLTEESGRKRGTTCTVKENSPESNKNYALEIYGRQSKCVE
HGRHWIAKKDLFTRTMLDWGSGCYKYQCTSDGLVLHVGSKQYLCQHKYQK
IEVEGFMSDWKVNGSLICPSCEEFCGEKDGNFCQQEIVEGGRGFVANIID
DDPEEDREITLDVNFSVQMKSKGWVIVSMVLFVYIFISCTT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004757XLOC_004757Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008508TCONS_00008508Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001577Peptidase_M8
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO:0007155cell adhesion
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007155 cell adhesion
biological_process GO:0006508 proteolysis
cellular_component GO:0016020 membrane
molecular_function GO:0004222 metalloendopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001577Peptidase M8, leishmanolysinPRINTSPR00782LSHMANOLYSINcoord: 137..166
score: 37.94
coord: 107..135
score: 25.62
coord: 76..105
score: 33.97
IPR001577Peptidase M8, leishmanolysinPFAMPF01457Peptidase_M8coord: 3..377
e-value: 1.1E-49
score: 169.5
NoneNo IPR availableGENE3D3.90.132.10coord: 54..174
e-value: 2.0E-40
score: 137.3
NoneNo IPR availableGENE3D2.10.55.10coord: 183..258
e-value: 8.3E-20
score: 70.5
NoneNo IPR availableGENE3D2.30.34.10coord: 273..375
e-value: 6.6E-24
score: 83.4
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 61..378
coord: 2..26

Blast
[Close]
BLAST of TCONS_00008508-protein vs. Swiss-Prot (Human)
Match: LMLN (Leishmanolysin-like peptidase OS=Homo sapiens GN=LMLN PE=2 SV=2)

HSP 1 Score: 324.709 bits (831), Expect = 7.616e-105
Identity = 167/375 (44.53%), Postives = 223/375 (59.47%), Query Frame = 0 
Query:    2 LLSTVKHEIYHALGFSVGLFAFYRDKNGKPLSNRLKNGLPEYNQETNLYQWSDRVLKTIIRTDWAVSGG-TVKHPVQLIVTPTVQREVRKHFACDDLEGAELENQGGEGTASTHWEKRLFENEAMTGTYTQHPVFSRITLALMEDTEWYKANYAMAEDLDWGKNLGCLFVKNNCRAWIANSIEQKLHTAPFCATLKQSPLHMRCTHSKLSLALCNLVKYSSTLPRDFQYFDKLGHISVKDIATYGGAVELADFCPFYQKFTLTEESGRKRGTTCTVKENSPESNKNYALEIYGRQSKCVEHGRHWIAKKDLFTRTMLDWGSGCYKYQCTSDGLVLHVGSKQYLCQHKYQKIEVEGFMSDWKVNGSLICPSCEEFC 375
            +LSTVKHE+ HALGFS GLFAFY DK+G PL++R  +GLP +N    LYQWSD+V++ + R  W V     V+H V L+VTP V  E RKHF C  LEG ELENQGG GT   HWEKRL ENEAMTG++TQ+ V SRITLALMEDT               G+ +                       +P+C TL+ +PL + C   + ++A+CNL K+   LP+++QYFD+L  I  +D+  YGG+VE+AD+CPF Q+F+       +R + C + EN PE  KNY  E YG  S C+     ++ +K     +  DWGSGCY+  C+  GL + V    YLC    Q + V   M+ W  +G+L+CPSC +FC
Sbjct:  266 MLSTVKHEVIHALGFSAGLFAFYHDKDGNPLTSRFADGLPPFNYSLGLYQWSDKVVRKVERL-WDVRDNKIVRHTVYLLVTPRVVEEARKHFDCPVLEGMELENQGGVGTELNHWEKRLLENEAMTGSHTQNRVLSRITLALMEDT---------------GRQM----------------------LSPYCDTLRSNPLQLTCRQDQRAVAVCNLQKFPKPLPQEYQYFDELSGIPAEDLPYYGGSVEIADYCPFSQEFSWHLSGEYQRSSDCRILENQPEIFKNYGAEKYGPHSVCLIQKSAFVMEKCERKLSYPDWGSGCYQVSCSPQGLKVWVQDTSYLCSRAGQVLPVSIQMNGWIHDGNLLCPSCWDFC 602
The following BLAST results are available for this feature:
BLAST of TCONS_00008508-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LMLN7.616e-10544.53Leishmanolysin-like peptidase OS=Homo sapiens GN=L... [more]
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