TCONS_00008364-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008364-protein
Unique NameTCONS_00008364-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length452

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008364-protein ID=TCONS_00008364-protein|Name=TCONS_00008364-protein|organism=Clytia hemisphaerica|type=polypeptide|length=452bp
MALLDLMGLGTDKQAVIIDFGTAFTKIGLAGEQVPRHIIRTELEKIINNK
LESVPILNGKTGLQGADKDNLSSLLKDFFHEIYFKQLLVNPKERRVVICD
SMLKPIEIRNLMAKILFTHFEVPSVTFIPSHLLALFACGLQSGLVVDVGY
TETAVVPVFEQGTILTGIEFIDLAALSLEEHINNQIMESGVVFIENQEKP
AKDHIKSLKSRILEDIKVRCCFVGRKDCNLEAVPVKYPLEGGITLNVDGK
IRAHAADTLFEGDEEGKSIATLILDSILKCPIDCRKMLAENIVLVGGSVM
MPGFESRLMAELKYLLKSDQYSQSLFLKKLAMKKPPVPANYCSWQGGALL
GALEILPELSIGRDRYKADPFIPDWSTVLAVNKEDVTKSLLDDDLKWKKL
RKTLPATSSASPLLSRAAPPTSSSSASAAALAAARSRSTLSISERVKQEL
SK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004693XLOC_004693Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008364TCONS_00008364Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004000Actin familySMARTSM00268actin_3coord: 13..378
e-value: 1.9E-25
score: 100.6
IPR004000Actin familyPFAMPF00022Actincoord: 12..367
e-value: 4.3E-45
score: 153.9
NoneNo IPR availableGENE3D3.30.420.40coord: 9..155
e-value: 1.0E-30
score: 106.0
NoneNo IPR availableGENE3D3.30.420.40coord: 156..330
e-value: 5.4E-21
score: 73.7
NoneNo IPR availableCDDcd00012NBD_sugar-kinase_HSP70_actincoord: 16..160
e-value: 8.1203E-6
score: 43.7316
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 139..367
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 12..146

Blast
[Close]
BLAST of TCONS_00008364-protein vs. Swiss-Prot (Human)
Match: ARP10 (Actin-related protein 10 OS=Homo sapiens GN=ACTR10 PE=1 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 7.396e-91
Identity = 157/397 (39.55%), Postives = 232/397 (58.44%), Query Frame = 0 
Query:    1 MALLDLMGLGTDKQAVIIDFGTAFTKIGLAGEQVPRHIIRTELEKIINNKLESVPILNGKTGLQGADKDNLSSLLKDFFHEIYFKQLLVNPKERRVVICDSMLKPIEIRNLMAKILFTHFEVPSVTFIPSHLLALFACGLQSGLVVDVGYTETAVVPVFEQGTILTGIEFIDLAALSLEEHINNQIMESGVVFIE-NQEKPAKDHIKSLKSRILEDIKVRCCFVG--RKDCNLEAVP---------------VKYPLEGGITLNVDGKIRAHAADTLFEGDEEGKSIATLILDSILKCPIDCRKMLAENIVLVGGSVMMPGFESRLMAELKYLLKSDQYSQSLFLKKLAMKKPPVPANYCSWQGGALLGALE-ILPELSIGRDRYKADPFIPDWSTV 378
            M L + +G G +K AV+ID G AFTK G AGE  PR II + +++    K   V   N  T       + L S LK+F H +YF+ LLVNP++RRVVI +S+L P   R  + ++LF +FEVPSV   PSHL+AL   G+ S +V+D GY E+ V+P++E   +L     + L   +L + +  Q++E   V     +E+     + S+   +LEDIK R CFV   ++   ++A                 V YPL+G   L++ G IR    + LFE D E +S+ATLILDS+++CPID RK LAEN+V++GG+ M+PGF  RL+AE++YL++  +Y ++L  K   +  PP  AN  +W GGA+ GAL+ IL   S+ ++ Y     IPDW ++
Sbjct:    1 MPLYEGLGSGGEKTAVVIDLGEAFTKCGFAGETGPRCIIPSVIKRAGMPKPVRVVQYNINT-------EELYSYLKEFIHILYFRHLLVNPRDRRVVIIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPVLNCWGALPLGGKALHKELETQLLEQCTVDTSVAKEQSLPSVMGSVPEGVLEDIKARTCFVSDLKRGLKIQAAKFNIDGNNERPSPPPNVDYPLDGEKILHILGSIRDSVVEILFEQDNEEQSVATLILDSLIQCPIDTRKQLAENLVVIGGTSMLPGFLHRLLAEIRYLVEKPKYKKALGTKTFRIHTPPAKANCVAWLGGAIFGALQDILGSRSVSKEYYNQTGRIPDWCSL 390
The following BLAST results are available for this feature:
BLAST of TCONS_00008364-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARP107.396e-9139.55Actin-related protein 10 OS=Homo sapiens GN=ACTR10... [more]
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