TCONS_00008205-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008205-protein
Unique NameTCONS_00008205-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length485

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008205-protein ID=TCONS_00008205-protein|Name=TCONS_00008205-protein|organism=Clytia hemisphaerica|type=polypeptide|length=485bp
MAENEGKRKLSEDEERPSENGDIKRLKVCEPQELGTLLYSGLTDYTERND
SAISKSPALQWSPFQYESLKGIKIRKVSTGPVSYHTLAISEDYKVYSWGY
NNKGQLGHGDCRNRRNPTLVESLSGYKVVDVATGRMHSLVLTDEGQVFAF
GDNSSGQCGVGSKDSQMSNPKRIDYDGASIVKFACGSEFSLILDDLGTVY
SFGHPEHGQLGHGTDSREIVAGKGEVFHFEHSPIPITSYREIDDGEVIFH
GQPRIVDIQCGNNHSCAIDEKQRIFTWGFGGYGRLGHNSTQNEMVPRLMK
CWYRITGRADGGIIRVACGSQFNIVQTTVAKCSYYFGQINMNGEAAMYPK
SIDDLQGWNVRRVVCSMRGWAALADDSVIAAQCSPGFGQLGMGFNKKSSA
RPLLVEPFEKMKVHHLGLGYMHGVFLVRNETEKDEKEMEKFEILSFEDND
KKVEEAPPAKGKGRGKAASKGKATARKAAPGRKKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004606XLOC_004606Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008205TCONS_00008205Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 274..288
score: 40.0
coord: 94..110
score: 38.24
coord: 147..163
score: 31.37
coord: 128..141
score: 48.81
coord: 258..274
score: 19.61
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 144..193
e-value: 5.6E-9
score: 36.4
coord: 197..268
e-value: 7.1E-9
score: 36.1
coord: 273..324
e-value: 2.0E-8
score: 34.6
coord: 94..141
e-value: 2.9E-14
score: 53.3
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 131..141
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 272..329
score: 11.027
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 93..144
score: 17.238
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 197..271
score: 13.559
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 145..196
score: 12.755
NoneNo IPR availableGENE3D2.130.10.30coord: 32..321
e-value: 2.2E-77
score: 260.3
coord: 322..452
e-value: 2.3E-6
score: 26.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 452..485
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 34..430

Blast
[Close]
BLAST of TCONS_00008205-protein vs. Swiss-Prot (Human)
Match: RCC2 (Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2)

HSP 1 Score: 293.508 bits (750), Expect = 1.267e-93
Identity = 157/427 (36.77%), Postives = 246/427 (57.61%), Query Frame = 0 
Query:   24 KRLKVCEPQELGTLLYSGLTDYTERNDSAISKSPALQ-------WSPFQYESLKGIKIRKVSTGPVSYHTLAISEDYKVYSWGYNNKGQLGHGDCRNRRNPTLVESLSGYKVVDVATGRMHSLVLTDEGQVFAFGDNSSGQCGVGSKDSQMSNPKRIDYDGASIVKFACGSEFSLILDDLGTVYSFGHPEHGQLGHGTDSREIVAGKGEVFHFEHSPIPITSYRE-IDDGEVIFHGQPRIVDIQCGNNHSCAIDEKQRIFTWGFGGYGRLGHNSTQNEMVPRLMKCWYRITGRADGGIIRVACGSQFNIVQTTVAKCSYYFGQINMNGEAAMYPKSIDDLQGWNVRRVVCSMRGWAALADDSVIAAQCSPGFGQLGMGFNK-KSSARPLLVEPFEKMKVHHLGLGYMHGVFLVRNETEKDEKEMEKF 441
            +R+K+   +  G LL  G T++       + K  A         W P +Y  L G+++R V +G  + H+L I+ + K++SWG N KGQLGHGD +    P L+E LS   +V  A GR H+L LT+ G VFAFG+N  GQ G+G++   + +P +I Y+G  I K ACG+EFS+I+D  G +YSFG PE+GQLGH +D + I   +   +  E  P  +  + E   DG+++      + D+ CG NH+  +D ++R+F+WGFGGYGRLGH   ++EMVPRL+K  +   GR   G  ++  G   +   + V    +++G  N + E+ MYPK++ DL GW +R + C        AD+S I+   SP FG+LG G +K KSS     V+  + +    + +GY H + + R+E+E ++++++K 
Sbjct:   93 ERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKL-FDFPGR---GASQIYAGYTCSFAVSEVGGL-FFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKEKIKKL 514
The following BLAST results are available for this feature:
BLAST of TCONS_00008205-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RCC21.267e-9336.77Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2[more]
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