TCONS_00008031-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00008031-protein
Unique Name	TCONS_00008031-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	380

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00008031-protein ID=TCONS_00008031-protein|Name=TCONS_00008031-protein|organism=Clytia hemisphaerica|type=polypeptide|length=380bp
RAETETKAKLEKVAEIKKINAQMMAIKSEIAKNEDLLKEFVLYKKFLDKL
TPPYIITERKRRKMQEKRLKEKEFAPIEKEPEKHPLRKKGSTTPADSDRQ
SRASLRSKGSRVKSHTSPRKRGSRAEIESETISIAESTVKSEEEDSDEEP
ELFFKQSHQLLDIFSELEEQNLSLIQNSQDTEEALDEMKKQIVHNKKKMN
KETDLLKLQIETLKETTRKEEEKAAELEMKSRMFSFGEFKAEDQEKTLAQ
LNKKVEEVYRNCIGNNEANISTLQMLTNIENRLEELFEMIEMMPPDKVEL
AEKAKDKERRLRLREEKLLEQKKHQEERIKKAIERAQAEPKKKTGRRLVF
RSCPPQTRKREDVTHEKHDKEEEELKYFFT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_004521	XLOC_004521	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00008031	TCONS_00008031	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR025252	DUF4200

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 164..191
None	No IPR available	COILS	Coil	Coil	coord: 297..339
None	No IPR available	COILS	Coil	Coil	coord: 241..261
None	No IPR available	COILS	Coil	Coil	coord: 196..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 334..380
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..152
IPR025252	Domain of unknown function DUF4200	PFAM	PF13863	DUF4200	coord: 1..52 e-value: 3.9E-11 score: 43.3

Blast

[Close]

BLAST of TCONS_00008031-protein vs. Swiss-Prot (Human)
Match: CP100 (Cilia- and flagella-associated protein 100 OS=Homo sapiens GN=CFAP100 PE=2 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 1.854e-91
Identity = 178/394 (45.18%), Postives = 253/394 (64.21%), Query Frame = 0

Query:    2 AETETKAKLEKVAEIKKINAQMMAIKSEIAKNEDLLKEFVLYKKFLDKLTPPYIITERKRRKMQEKRLKEKEFAPIEKEPEKHP------LRKKGSTTPADSDRQSRASLR----SKGSRVKSHTSPRKRGSRAEIESETIS-IAESTVKSEEEDSD---EEPELFFKQSHQLLDIFSELEEQNLSLIQNSQDTEEALDEMKKQIVHNKKKMNKETDLLKLQIETLKETTRKEEEKAAELEMKSRMFSFGEFKAEDQEKTLAQLNKKVEEVYRNCIGN-NEANISTLQMLTNIENRLEELFEMIEMMPPDKVELAEKAKDKERRLRLREEKLLEQKKHQEERIKKAIERAQAEPKKKTGRRLVFRSCPPQTRKREDVTHEKHDKEEEELKYFFT 380
            AE ETKAK+EK+ EI+ +  Q++ IKSEI++ ED LK + +YK FL KL+P   + E++++    K+ KE   A  E      P      ++ K S+  A   + ++   R     +  R  S+ S  ++GS+    S   S  + S +   +ED+D   EEP+L+F +  QLLD+F ELEEQNLSLIQNSQ+TE+ L+E+   + H + +M++E + LK  + T+  +  KEE+ AAELE+K+R+F FGE+K + Q+K L  LN KV +VYR+C G   EAN+ T+QMLT IE++L+EL E +E +P  K+E AE+AK+KERR+RLREEKL  QK  QEE +++A  RAQAE KKK GR LV RS PP  R ++   H   DKEEEEL +FFT
Sbjct:  218 AEKETKAKIEKILEIRDLTTQIVNIKSEISRFEDTLKHYKVYKDFLYKLSPKEWLEEQEKKHSFLKKAKEVSEASKESSVNSTPGDKGPGIKGKASSMWAKEGQGTKKPWRFLQTMRLGRSPSYLSSPQQGSQPSESSGGDSRGSNSPIPPTQEDTDSDGEEPQLYFTEPQQLLDVFRELEEQNLSLIQNSQETEKTLEELSHTLKHTQIRMDREVNQLKQWVTTMMMSITKEEDTAAELELKARVFHFGEYKGDQQDKLLESLNCKVLDVYRHCTGTQQEANLGTVQMLTIIEHQLDELLENLEHVPQVKIEQAERAKEKERRIRLREEKLQMQKILQEEHLQRARARAQAEIKKKRGRTLVCRSRPPAHRIKQQSEHTLMDKEEEELLFFFT 611

The following BLAST results are available for this feature:

BLAST of TCONS_00008031-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00008031-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CP100	1.854e-91	45.18	Cilia- and flagella-associated protein 100 OS=Homo...	[more]

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TCONS_00008031-protein (polypeptide) - C. hemisphaerica