TCONS_00007601-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007601-protein
Unique NameTCONS_00007601-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length677

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007601-protein ID=TCONS_00007601-protein|Name=TCONS_00007601-protein|organism=Clytia hemisphaerica|type=polypeptide|length=677bp
MAVSKVFSPGDLVWAKMKGYPHWPARVDEPQPGQVIPKKKYLIFFFGTHE
TGFLPADGLYNFEKHKEKWFKPNKRRGFPEALDEIINNPTVVHVEAPPDE
HPSSESEPEEGADGDAEGAKPPPQKKKKPAPPKRKKPQEPKKSNKKVRAV
KSQDEIDDEDDWSDSDDEALKIDEPKQKKKPEDYESFEEPTSSSSSESED
SGEDYVPEEIEKKKKPPAKRAPAKKAAPKKPPAEKKPRAKKEPSEKKPRK
APQKKPAAKAKKSTNDGSDSVSSISSSSSDDSSDDDIEQLRKKILNKNTE
LTEEEKAAQEKRAEEARVRDAERQRLAEESRIRREQLKKEREEEKKKKKE
KKKAAASDDSDGSSKSESESDQEEVVAKKKKKNVTSSKKKKEEEAKKEST
DEEEEKDENEEEKIEEPEEEETEEEKQRKEEERKQKEEEKKRRDEERKKA
QAEKRKQREEEKRREKEERKKEKEDRDKKRKEKAERKKELVKKEKEIKEE
KRKSKEKSDEKKKERLEKADDAFNRIATESKTTGIAERLHELEVELKRAL
SLKEHDHERCLKALQNISDLTLTPSILMKNKTIVPTIKKVRAYKANQEVS
DKASKLYNKFKSLFAVATPAKGTITKPAVMTPATPAPPQDGSTVVTTTQS
NTHVQINISINSNGENTPSVSISTPPT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004289XLOC_004289Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007601TCONS_00007601Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000313PWWP_dom
IPR021567LEDGF
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 287..359
NoneNo IPR availableCOILSCoilCoilcoord: 388..412
NoneNo IPR availableCOILSCoilCoilcoord: 414..517
NoneNo IPR availableGENE3D2.30.30.140coord: 7..89
e-value: 3.0E-21
score: 75.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..516
NoneNo IPR availableCDDcd05834HDGF_relatedcoord: 7..88
e-value: 5.14953E-32
score: 118.542
NoneNo IPR availableSUPERFAMILY140576HIV integrase-binding domaincoord: 536..613
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 7..129
IPR000313PWWP domainSMARTSM00293PWWP_4coord: 7..63
e-value: 8.2E-14
score: 61.9
IPR000313PWWP domainPFAMPF00855PWWPcoord: 7..87
e-value: 1.2E-15
score: 57.6
IPR000313PWWP domainPROSITEPS50812PWWPcoord: 9..65
score: 13.78
IPR021567Lens epithelium-derived growth factor (LEDGF)PFAMPF11467LEDGFcoord: 537..617
e-value: 8.6E-22
score: 76.9

Blast
[Close]
BLAST of TCONS_00007601-protein vs. Swiss-Prot (Human)
Match: HDGR2 (Hepatoma-derived growth factor-related protein 2 OS=Homo sapiens GN=HDGFL2 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.014e-30
Identity = 61/114 (53.51%), Postives = 74/114 (64.91%), Query Frame = 0 
Query:    6 VFSPGDLVWAKMKGYPHWPARVDEPQPGQV-IPKKKYLIFFFGTHETGFLPADGLYNFEKHKEKWFKPNKRRGFPEALDEIINNPTVVHVEAPPDEHPSS---ESEPEEGADGD 115
             F PGDLV+AKMKGYPHWPAR+D+   G V  P  KY IFFFGTHET FL    L+ ++K K+K+ KPNKR+GF E L EI NNP   +   PP     S   E+ P +G+D D
Sbjct:    4 AFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFPYDKCKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPPPVSSSDSEAPEANPADGSDAD 117
The following BLAST results are available for this feature:
BLAST of TCONS_00007601-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HDGR21.014e-3053.51Hepatoma-derived growth factor-related protein 2 O... [more]
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