TCONS_00007552-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007552-protein
Unique NameTCONS_00007552-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length502

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007552-protein ID=TCONS_00007552-protein|Name=TCONS_00007552-protein|organism=Clytia hemisphaerica|type=polypeptide|length=502bp
MPDMDEENAPKAILTSMEVKDIIASSYGENGKRCYKVQWKESWVFEEHLV
NCKQLLAKFWKENSKGAKQQTNGNFATPIPENGLPQRGPTMSSRKRDAKG
KAKVNIEAMANHLKQGSSSKGPSSATEMDGVWVLDSNHGSDNESDFEAGS
DFEDETIKSSKKKNFTPYELKCDVCEAEFRKITEFRKHYASQHPGVNPFD
CEVCHQRFGKKENLMRHMMKHTGEYPYFCNFCGKTAADPSTLRKHVEAKH
KIEAKNANTGIKKSTPNKNNGSQASMICHICSKEIETIKAFKEHFRAEHP
DMKPFQCDICGKGFEKKENLTRHIRVHTNDRIYSCDLCGKSYTDGSSLKK
HVKMQICILNRRSGKKVTKAVAEVIKTRGDVASASQVDLSFGKSEDEVQV
TDSQAISEGNSQSNDMETEAQFIIEGSTSQQPGEEQNEESQQKERVNSIE
SLLQTIKQVNELGTVVQSNGGTDSEQVAEMSSRIVFPTINIPKGFEKGDG
GS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004271XLOC_004271Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007552TCONS_00007552Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
IPR016197Chromodomain-like
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 227..250
e-value: 0.006
score: 25.8
coord: 199..221
e-value: 0.0086
score: 25.3
coord: 305..327
e-value: 7.1E-5
score: 32.2
coord: 170..193
e-value: 0.064
score: 22.4
coord: 333..353
e-value: 11.0
score: 13.0
coord: 276..299
e-value: 5.9
score: 15.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 307..327
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 172..193
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 201..221
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 333..367
score: 10.221
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 227..255
score: 9.681
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 305..332
score: 15.105
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 170..198
score: 9.785
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 199..226
score: 13.921
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 276..304
score: 8.621
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 193..245
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 299..351
NoneNo IPR availableGENE3D3.30.160.60coord: 341..451
e-value: 1.6E-7
score: 30.6
NoneNo IPR availableGENE3D3.30.160.60coord: 293..317
e-value: 1.3E-11
score: 43.8
NoneNo IPR availableGENE3D3.30.160.60coord: 195..211
e-value: 5.4E-9
score: 35.5
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 171..194
e-value: 0.064
score: 13.1
NoneNo IPR availableGENE3D3.30.160.60coord: 236..256
e-value: 0.0025
score: 17.4
NoneNo IPR availableGENE3D2.40.50.40coord: 15..73
e-value: 1.0E-6
score: 27.9
NoneNo IPR availableGENE3D3.30.160.60coord: 212..235
e-value: 2.2E-14
score: 53.0
coord: 318..340
e-value: 2.5E-18
score: 65.6
NoneNo IPR availableGENE3D4.10.1050.10coord: 257..292
e-value: 7.3E-4
score: 19.4
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 305..327
e-value: 1.8E-6
score: 28.0
coord: 333..353
e-value: 0.002
score: 18.4
coord: 199..221
e-value: 0.0011
score: 19.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 392..415
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..95
NoneNo IPR availableCDDcd00024CHROMOcoord: 18..62
e-value: 1.42307E-5
score: 41.8659
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 160..194
e-value: 3.5E-4
score: 20.0
IPR016197Chromo domain-likeSUPERFAMILY54160Chromo domain-likecoord: 17..64

Blast
[Close]
BLAST of TCONS_00007552-protein vs. Swiss-Prot (Human)
Match: MYNN (Myoneurin OS=Homo sapiens GN=MYNN PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.135e-26
Identity = 63/185 (34.05%), Postives = 87/185 (47.03%), Query Frame = 0 
Query:  167 PYELKCDVCEAEFRKITEFRKHYASQHPGVNPFDCEVCHQRFGKKENLMRHMMKHTGEYPYFCNFCGKTAADPSTLRKHVEAKHKIEAKNANTGIKKSTPNKNNGSQASMICHICSKEIETIKAFKEHFRAEHPDMKPFQCDICGKGFEKKENLTRHIRVHTNDRIYSCDLCGKSYTDGSSLKKH 351
            PY  KC++C+  F +  +   H    H    P+ C+VC+ +F    NL  H  KH+GE PY C+ CG+  A  STL  HV                     + +  +   +C  C K      +   H R +H   KP+ C ICGK F     L +H R HT +R + C+LCG SYTD  +LKKH
Sbjct:  357 PY--KCELCDKGFAQKCQLVFHSRMHHGEEKPYKCDVCNLQFATSSNLKIHARKHSGEKPYVCDRCGQRFAQASTLTYHV---------------------RRHTGEKPYVCDTCGKAFAVSSSLITHSR-KHTGEKPYICGICGKSFISSGELNKHFRSHTGERPFICELCGNSYTDIKNLKKH 517

HSP 2 Score: 97.0561 bits (240), Expect = 2.487e-21
Identity = 60/191 (31.41%), Postives = 83/191 (43.46%), Query Frame = 0 
Query:  172 CDVCEAEFRKITEFRKHYASQHPGVNPFDCEVCHQRFGKKENLMRHMMKHTGEYPYFCNFCGKTAADPSTLRKHVEAKH------KIEAKN---ANTGIKKSTPNKNNGSQASMICHICSKEIETIKAFKEHFRAEHPDMKPFQCDICGKGFEKKENLTRHIRVHTNDRIYSCDLCGKSYTDGSSLKKHVK 353
            C+ C   F + +  R+H    H GV P+ C +C + F +   L  H+  HTGE PY C  C K  A    L  H    H      K +  N   A +   K    K++G +   +C  C +          H R  H   KP+ CD CGK F    +L  H R HT ++ Y C +CGKS+     L KH +
Sbjct:  304 CNTCGKVFSEASSLRRH-MRIHKGVKPYVCHLCGKAFTQCNQLKTHVRTHTGEKPYKCELCDKGFAQKCQLVFHSRMHHGEEKPYKCDVCNLQFATSSNLKIHARKHSGEKP-YVCDRCGQRFAQASTLTYHVR-RHTGEKPYVCDTCGKAFAVSSSLITHSRKHTGEKPYICGICGKSFISSGELNKHFR 491
The following BLAST results are available for this feature:
BLAST of TCONS_00007552-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MYNN1.135e-2634.05Myoneurin OS=Homo sapiens GN=MYNN PE=1 SV=1[more]
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