green fluorescent protein (polypeptide) - C. hemisphaerica

Overview
Namegreen fluorescent protein
Unique NameTCONS_00007379-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length280

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007379-protein ID=TCONS_00007379-protein|Name=green fluorescent protein|organism=Clytia hemisphaerica|type=polypeptide|length=280bp
MNTIIRCYRVMEVRKIAYNSQIRRKCTLLEKVFRAQNLNQAAKMSSTALT
EGGKLFEKEIPYITELEGDVEGMKFTIKGEGTGDGTTGLIKSKYICTTGD
LPVPWATILSSLSYGVFCFAKYPRHIADFFKSTQPDGYSQDRIISFDDDG
QYDVKAKITYEDGTLYNRVVLDGTGFKSNGNILGMRVLYHSPPHIIYILP
DRKNGGMKIEYNKAFDVMGGGHQMTRHAQFNKPLGAWEEDYPMYHHLSVW
TSFGKDPDDDETDHLTIVEVIKAIDLDTYK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004150XLOC_004150Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007379TCONS_00007379Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000786Green_fluorescent_prot
IPR011584GFP-related
IPR009017GFP
Vocabulary: Biological Process
TermDefinition
GO:0006091generation of precursor metabolites and energy
GO:0008218bioluminescence
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008218 bioluminescence
biological_process GO:0006091 generation of precursor metabolites and energy
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000786Green fluorescent protein, GFPPRINTSPR01229GFLUORESCENTcoord: 155..175
score: 38.1
coord: 196..217
score: 22.73
coord: 97..117
score: 60.0
coord: 118..133
score: 32.5
coord: 51..75
score: 48.0
coord: 239..257
score: 36.84
coord: 176..195
score: 45.0
coord: 219..238
score: 35.0
coord: 76..96
score: 47.62
NoneNo IPR availableGENE3D2.40.155.10coord: 60..273
e-value: 7.4E-56
score: 188.7
IPR011584Green fluorescent protein-relatedPFAMPF01353GFPcoord: 55..269
e-value: 1.1E-42
score: 145.9
IPR009017Green fluorescent proteinSUPERFAMILY54511GFP-likecoord: 48..274

Blast
The following BLAST results are available for this feature:
BLAST of green fluorescent protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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