TCONS_00006973-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006973-protein
Unique NameTCONS_00006973-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length188

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006973-protein ID=TCONS_00006973-protein|Name=TCONS_00006973-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
EHLVDPSQDPEAKNSIFNQLYEALRPDKCEVKLDYRWPVKYDQWWECKFI
GEGIIDQGGGFRDSLSDLAEELCPSSQNNSPLPLPYFVRSPNQTATSNVY
RDCYVPNPDCHQSSRYEWIGQLMGACLRGKESLVISLPPLIWKLLNGESI
SFDKDYHTIDATEVQLHESLLKAEEEKFNEAFGNILTY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003894XLOC_003894Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006973TCONS_00006973Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000569HECT_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004842 ubiquitin-protein transferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000569HECT domainPFAMPF00632HECTcoord: 101..177
e-value: 8.6E-6
score: 25.3
IPR000569HECT domainSUPERFAMILY56204Hect, E3 ligase catalytic domaincoord: 42..179
NoneNo IPR availableGENE3D3.90.1750.10coord: 11..181
e-value: 5.8E-23
score: 80.7

Blast
[Close]
BLAST of TCONS_00006973-protein vs. Swiss-Prot (Human)
Match: HECD3 (E3 ubiquitin-protein ligase HECTD3 OS=Homo sapiens GN=HECTD3 PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.626e-73
Identity = 109/189 (57.67%), Postives = 141/189 (74.60%), Query Frame = 0 
Query:    1 EHLVDPSQDPEAKNSIFNQLYEALRP-DKCEVKLDYRWPVKYDQWWECKFIGEGIIDQGGGFRDSLSDLAEELCPSSQNNSPLPLPYFVRSPNQTATSNVYRDCYVPNPDCHQSSRYEWIGQLMGACLRGKESLVISLPPLIWKLLNGESISFDKDYHTIDATEVQLHESLLKAEEEKFNEAFGNILTY 188
            EH   PS+DP  KN++F Q+YE L+P DK E  LDYRWP++YDQWWECKFI EGIIDQGGGFRDSL+D++EELCPSS + +P+PLP+FVR+ NQ   +   RD YVPNP C   ++YEWIGQLMGA LRGKE LV++LP  +WK L+GE +S+ KD+  +D+  V+L E +   ++E F   FG  LT+
Sbjct:  483 EHRACPSRDPACKNAVFTQVYEGLKPSDKYEKPLDYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSAD-TPVPLPFFVRTANQGNGTGEARDMYVPNPSCRDFAKYEWIGQLMGAALRGKEFLVLALPGFVWKQLSGEEVSWSKDFPAVDSVLVKLLEVMEGMDKETFEFKFGKELTF 670
The following BLAST results are available for this feature:
BLAST of TCONS_00006973-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HECD32.626e-7357.67E3 ubiquitin-protein ligase HECTD3 OS=Homo sapiens... [more]
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