TCONS_00005762-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005762-protein
Unique NameTCONS_00005762-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length147

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005762-protein ID=TCONS_00005762-protein|Name=TCONS_00005762-protein|organism=Clytia hemisphaerica|type=polypeptide|length=147bp
MKVLVCLFALFVAANCSIIQTRPCAGDKSQSELISVAIEPCESGNCVLHK
GSEASIIIKMKPKSDITSLTTEVKGKIGIYIPFPLQNPDACATAGLTCPL
KAGQEVTYKFSLPVSKYYPSLSLVVRWRLFDQNKNTQICFEFPTELQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003272XLOC_003272Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005762TCONS_00005762Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003172ML_dom
IPR033916ML_Npc2-like
IPR014756Ig_E-set
Vocabulary: Biological Process
TermDefinition
GO:0032367intracellular cholesterol transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032367 intracellular cholesterol transport
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003172MD-2-related lipid-recognition domainSMARTSM00737pgtp_13coord: 21..144
e-value: 4.8E-27
score: 105.8
IPR003172MD-2-related lipid-recognition domainPFAMPF02221E1_DerP2_DerF2coord: 20..145
e-value: 9.2E-24
score: 84.3
NoneNo IPR availableGENE3D2.60.40.770coord: 17..147
e-value: 1.2E-30
score: 106.3
IPR033916ML domain, Npc2 likeCDDcd00916Npc2_likecoord: 21..143
e-value: 7.35434E-37
score: 123.573
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 19..146

Blast
[Close]
BLAST of TCONS_00005762-protein vs. Swiss-Prot (Human)
Match: NPC2 (Epididymal secretory protein E1 OS=Homo sapiens GN=NPC2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.729e-17
Identity = 37/112 (33.04%), Postives = 57/112 (50.89%), Query Frame = 0 
Query:   36 VAIEPCESGNCVLHKGSEASIIIKMKPKSDITSLTTEVKG-KIGIYIPFPLQNPDACATAGLTCPLKAGQEVTYKFSLPVSKYYPSLSLVVRWRLFDQNKNTQICFEFPTEL 146
            V + PC +  C L KG   S+ +         S    V G  +G+ +PFP+  PD C + G+ CP++  +  +Y   LPV   YPS+ LVV W+L D    +  C+E P ++
Sbjct:   37 VNVSPCPTQPCQLSKGQSYSVNVTFTSNIQSKSSKAVVHGILMGVPVPFPIPEPDGCKS-GINCPIQKDKTYSYLNKLPVKSEYPSIKLVVEWQLQDDKNQSLFCWEIPVQI 147
The following BLAST results are available for this feature:
BLAST of TCONS_00005762-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NPC23.729e-1733.04Epididymal secretory protein E1 OS=Homo sapiens GN... [more]
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