TCONS_00005587-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005587-protein
Unique NameTCONS_00005587-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length224

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005587-protein ID=TCONS_00005587-protein|Name=TCONS_00005587-protein|organism=Clytia hemisphaerica|type=polypeptide|length=224bp
MATIPDNIKELWSNADAICFDVDSTVCTGEAIDDFAAFLGIGDQVAELTR
RAMGEGLSFRQSLDERLKLMKPSKQQLDGFIETHPLQLTPGVKKLVSKLH
ERKKDVYLVSGGFRSFIAPVAKKLNIPLDNLFTNIFIFNDDGSYGGFDKD
QPTSSSGGKKVVATKLKTEKGYKSLVMIGDGVTDLEAYPPADLFIGFGGN
KIRENVRQNSPWFVTQFQELIDVL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003172XLOC_003172Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005587TCONS_00005587Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD-like_dom
IPR023190Pser_Pase_dom_2
Vocabulary: Biological Process
TermDefinition
GO:0006564L-serine biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004647phosphoserine phosphatase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006564 L-serine biosynthetic process
molecular_function GO:0004647 phosphoserine phosphatase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023214HAD-like domainGENE3D3.40.50.1000coord: 75..224
e-value: 1.0E-14
score: 53.8
IPR023214HAD-like domainSUPERFAMILY56784HAD-likecoord: 6..224
NoneNo IPR availableTIGRFAMTIGR00338TIGR00338coord: 8..210
e-value: 3.1E-51
score: 172.0
NoneNo IPR availablePFAMPF00702Hydrolasecoord: 16..191
e-value: 1.7E-14
score: 54.5
NoneNo IPR availableTIGRFAMTIGR01488TIGR01488coord: 17..188
e-value: 2.7E-29
score: 100.3
NoneNo IPR availableSFLDSFLDG01136C1.6:_Phosphoserine_Phosphatacoord: 14..223
e-value: 0.0
score: 163.3
NoneNo IPR availableCDDcd01427HAD_likecoord: 78..187
e-value: 2.33839E-10
score: 54.2983
IPR023190Phosphoserine phosphatase, domain 2GENE3D1.10.150.210coord: 28..74
e-value: 2.8E-17
score: 62.0

Blast
[Close]
BLAST of TCONS_00005587-protein vs. Swiss-Prot (Human)
Match: SERB (Phosphoserine phosphatase OS=Homo sapiens GN=PSPH PE=1 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 2.874e-80
Identity = 112/218 (51.38%), Postives = 152/218 (69.72%), Query Frame = 0 
Query:    7 NIKELWSNADAICFDVDSTVCTGEAIDDFAAFLGIGDQVAELTRRAMGEGLSFRQSLDERLKLMKPSKQQLDGFIETHPLQLTPGVKKLVSKLHERKKDVYLVSGGFRSFIAPVAKKLNIPLDNLFTNIFIFNDDGSYGGFDKDQPTSSSGGKKVVATKLKTEKGYKSLVMIGDGVTDLEAYPPADLFIGFGGNKIRENVRQNSPWFVTQFQELIDVL 224
             +++L+ +ADA+CFDVDSTV   E ID+ A   G+ D V+E+TRRAMG  + F+ +L ERL L++PS++Q+   I   P  LTPG+++LVS+L ER   V+L+SGGFRS +  VA KLNIP  N+F N   F  +G Y GFD+ QPT+ SGGK  V   LK +  +K ++MIGDG TD+EA PPAD FIGFGGN IR+ V+ N+ W++T F EL+  L
Sbjct:    6 ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGEL 223
The following BLAST results are available for this feature:
BLAST of TCONS_00005587-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SERB2.874e-8051.38Phosphoserine phosphatase OS=Homo sapiens GN=PSPH ... [more]
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