TCONS_00005556-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005556-protein
Unique NameTCONS_00005556-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length337

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005556-protein ID=TCONS_00005556-protein|Name=TCONS_00005556-protein|organism=Clytia hemisphaerica|type=polypeptide|length=337bp
MAISKKVVFIGNPGVGKSTLLNCLLGRSAFKSGVNIATGISYQLQTEVDE
VRGVTFCDTPGLKDVAMRNKAAIAITEALKQGGEFLVTFTITLEAGRVKP
EDISTIEAVVKAAPEIRDFGLVINKLSKNLYNRLSSNASQKESVIKEVTK
SLTCNQPSVLLLQNNDNLEGEENAHTNLPSLSDFVFRTMKSIVIHTNNVQ
DVNAGQQYNVAYQREMAAKMKAEKQETERLRKEREEEARRQARQRQEAED
RRRRQEAERQQREWEYEQQRRREREREQERLQREREARQAAEQRRRQEEI
EREKVRQRQEEERRQRQLTYQRQQAAARARDDGCIIL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003166XLOC_003166Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005556TCONS_00005556Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 213..317
NoneNo IPR availableGENE3D3.40.50.300coord: 4..332
e-value: 1.5E-20
score: 73.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..337
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 6..102
e-value: 5.6E-10
score: 39.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..126
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 128..200
coord: 5..40

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005556-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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