TCONS_00005509-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005509-protein
Unique NameTCONS_00005509-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length253

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005509-protein ID=TCONS_00005509-protein|Name=TCONS_00005509-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp
MSMMEELNEKLREACCMGDNESVYRYLTQGADVNSKNKMNGWTCLHWAAK
RGHTNLVEVLLRSNADPNVLNDKQQTALEVADLDSVKDILKDKSNVGSSF
KPVQAGENDTTGVKFVPNYLAHPVFPYGANQQQRTVYPPAAFQPSVTTGT
TASQSHVISGNDSEDDELVLRVRYPKSNEMDFIEIELDMNELTYDNLVKT
CTNEFKIDTALEICKIRKLPNVIVRKDKDMKRLKPFQELEIFTGKRKSVD
DFQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003127XLOC_003127Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005509TCONS_00005509Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 40..69
e-value: 1.9E-7
score: 40.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 40..72
score: 13.304
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 2..167
e-value: 8.2E-21
score: 73.6
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 14..81
e-value: 1.5E-10
score: 41.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 6..81
score: 19.598
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 10..89
NoneNo IPR availableCDDcd00204ANKcoord: 11..90
e-value: 1.33933E-18
score: 77.809

Blast
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BLAST of TCONS_00005509-protein vs. Swiss-Prot (Human)
Match: ANR40 (Ankyrin repeat domain-containing protein 40 OS=Homo sapiens GN=ANKRD40 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 1.194e-23
Identity = 49/138 (35.51%), Postives = 74/138 (53.62%), Query Frame = 0 
Query:    5 EELNEKLREACCMGDNESVYRYLTQGADVNSKNKMNGWTCLHWAAKRGHTNLVEVLLRSNADPNVLNDKQQTALEVADLDSVKDILKDKSNVGSSFKPVQAGE-NDTTGVKFVPNYLAHPVFPYGANQQQRTVYPPAA 141
            +E  E+LREA  +GD   V + +  G DVNS+N++NGWTCLHWA KR H  +V  LL+S AD  +L  K +  +++     ++ I+  +             +    + + FVPNYLA+P FP+        +Y P A
Sbjct:    8 KEQQERLREAAALGDIREVQKLVESGVDVNSQNEVNGWTCLHWACKRNHGQVVSYLLKSGADKEILTTKGEMPVQLTSRREIRKIMGVEEEDDDDDDDDNLPQLKKESELPFVPNYLANPAFPF--------IYTPTA 137

HSP 2 Score: 81.6481 bits (200), Expect = 5.552e-18
Identity = 49/106 (46.23%), Postives = 61/106 (57.55%), Query Frame = 0 
Query:  138 PPAAFQPSVTTGTTASQSHVISGNDSEDDELVLRVRY--PKSNEMDFIEIELDMNELTYDNLVKTCTNEFKIDTALEICKIRKLPNVIVRKDKDMKRLKPFQELEI 241
            P  AFQP   TG                 ELVL+VR   P   E DFIEIELD  ELTY  L++ C  E  ++   ++ KIRKLPN ++RKDKD+ RL+ FQELE+
Sbjct:  241 PAPAFQPFFFTGAFPFNMQ----------ELVLKVRIQNPSLRENDFIEIELDRQELTYQELLRVCCCELGVNPD-QVEKIRKLPNTLLRKDKDVARLQDFQELEL 335
The following BLAST results are available for this feature:
BLAST of TCONS_00005509-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANR401.194e-2335.51Ankyrin repeat domain-containing protein 40 OS=Hom... [more]
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