TCONS_00005257-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00005257-protein
Unique Name	TCONS_00005257-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	471

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00005257-protein ID=TCONS_00005257-protein|Name=TCONS_00005257-protein|organism=Clytia hemisphaerica|type=polypeptide|length=471bp
MDTNAKRGLLKPMDSYDSEEDSISSDDELLGGEERVPSIQTRSGAPPASS
FTDPDDMSASLNAPEDKGNVIYIIFFIQGIGMLLPWNFFITAKSYFSYKF
EENATFQDRFENAFALAAMIPGVLSLLFNIFMTGRISRNFRLTLSLTVMF
LAFVATTVLVKVDTQDKPTMFFAITVATCTILNLATGIFQGTIFGIAGII
GSRYMQAIMSGQATAGIFAAVADLATKLANPNYAKEPTTSALIYFIIASA
FIIITGIAYSTLFRLPRMQFYFRRFERHTERDIENRQTANHTPNVEKIPY
VLILKAISGKAASVFIVFAITLTCFPAIMAGISSTNKGNGSVWDNELFAT
LVVFLVFNVGDWIGRILAGIVQIVNEKSKWLIVLCISRIVFIPLFLMCNY
EHRVLPYVFNHDFWPIIINILFSVSNGYLGSLGMMYGPKMVALEYGETAG
TMMSLFLQMGLTFGACLSFAF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002998	XLOC_002998	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00005257	TCONS_00005257	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002259	Eqnu_transpt
IPR020846	MFS_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005337	nucleoside transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005337	nucleoside transmembrane transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002259	Equilibrative nucleoside transporter	PRINTS	PR01130	DERENTRNSPRT	coord: 210..230 score: 48.41 coord: 353..374 score: 43.94 coord: 412..428 score: 50.0 coord: 431..447 score: 39.22 coord: 182..204 score: 35.51 coord: 449..471 score: 51.33 coord: 381..398 score: 47.22
IPR002259	Equilibrative nucleoside transporter	PIRSF	PIRSF016379	ENT	coord: 22..471 e-value: 1.1E-93 score: 312.4
IPR002259	Equilibrative nucleoside transporter	PFAM	PF01733	Nucleoside_tran	coord: 177..471 e-value: 1.3E-70 score: 238.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 69..467

Blast

[Close]

BLAST of TCONS_00005257-protein vs. Swiss-Prot (Human)
Match: S29A3 (Equilibrative nucleoside transporter 3 OS=Homo sapiens GN=SLC29A3 PE=1 SV=3)

HSP 1 Score: 249.595 bits (636), Expect = 1.940e-77
Identity = 159/441 (36.05%), Postives = 229/441 (51.93%), Query Frame = 0

Query:   55 DDMSASLNAPEDKGNVIYIIFFIQGIGMLLPWNFFITAKSYFSYKFE-----------ENATFQDRFENAFALAAMIPGVLSLLFNIFMTGRISRNFRLTLSLTVMFLAFVATTVLVKVDTQDKPTMFFAITVATCTILNLATGIFQGTIFGIAGIIGSRYMQAIMSGQATAGIFAAVADLATKLANPNYAKEPTTSALIYFIIASAFIIITGIAYSTLFRLPRMQFYFRRF--------ERHTERD------IENRQTANHTPNVEKIPYVLILKAISGKAASVFIVFAITLTCFPAIMAGISSTNKGNGSVWDNELFATLVVFLVFNVGDWIGRILAGIVQIVNEKSKWLIVLCISRIVFIPLFLMCNYEHRVL--PYVFNHDFWPIIINILFSVSNGYLGSLGMMYGPKMVALEYGETAGTMMSLFLQMGLTFGACLS 468
            D     L  PED+    YIIFF  GIG LLPWNFFITAK Y+ +K             E +   + FE+  A+A+ +P +L L+ N  +  R++ + R+  SLTV+   F+  T LVKVDT      FFA+T+    IL+ A+ +F  +I+G+ G    R  QA++SG A  G  +AVA L    A+ +       SAL +F+ A+ F+++    Y  L RL   ++Y R          E    +D      + +R   +HTP     P   ILK  +     V  VF IT   +PAI   I S NKG+GS+W  + F  L  FL++N  D  GR L   +Q+    SK L    + R   IPLF++CNY+ RV     VF  D +P +++ L  +SNGYL +L ++YGPK+V  E  E  G +MS ++ +GLT G+  S
Sbjct:   37 DRPPPGLQRPEDRFCGTYIIFFSLGIGSLLPWNFFITAKEYWMFKLRNSSSPATGEDPEGSDILNYFESYLAVASTVPSMLCLVANFLLVNRVAVHIRVLASLTVILAIFMVITALVKVDTSSWTRGFFAVTIVCMVILSGASTVFSSSIYGMTGSFPMRNSQALISGGAMGGTVSAVASLVDLAASSDVRN----SALAFFLTATVFLVLCMGLYLLLSRLEYARYYMRPVLAAHVFSGEEELPQDSLSAPSVASRFIDSHTP-----PLRPILKKTASLGFCVTYVFFITSLIYPAICTNIESLNKGSGSLWTTKFFIPLTTFLLYNFADLCGRQLTAWIQVPGPNSKALPGFVLLRTCLIPLFVLCNYQPRVHLKTVVFQSDVYPALLSSLLGLSNGYLSTLALLYGPKIVPRELAEATGVVMSFYVCLGLTLGSACS 468

The following BLAST results are available for this feature:

BLAST of TCONS_00005257-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00005257-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S29A3	1.940e-77	36.05	Equilibrative nucleoside transporter 3 OS=Homo sap...	[more]

You are here

TCONS_00005257-protein (polypeptide) - C. hemisphaerica