TCONS_00004992-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004992-protein
Unique NameTCONS_00004992-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length566

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004992-protein ID=TCONS_00004992-protein|Name=TCONS_00004992-protein|organism=Clytia hemisphaerica|type=polypeptide|length=566bp
MSRSSSTLPPLPGSPGVFNCKSEKKSESQKKMDITIHVCDEAKNLKKDFS
CPKSLLLEEMKYFQDYLSSDHQTWEDIDISVHCDVKIFDWLIRYVKRDKE
NQDSGPILSAKSAVSILISSEFLKMAKLVERCITFCHDHMSEIIASPCNM
NCINDPLVKRISATFTQHDLEQVIDKKDKFKSKLFCKKIEELFNPNFSNE
YSHNNASKLYKCLHCQKLLLPPVEQSIKCTVARTMIDHHGNLQYVHSRDT
TWDVQEYLQNLKQQFKTWRSVFWRVWSVINFLQCNHCDEVFPVSDYNCCR
YHPQQPIRNGTQAIAYPCCDQKSFHFEPIKSKNGCKFGNHQVSFKDNDVL
HSQVIFDELLGVASLVCEERTPIQEHTAYSLDAMIKTEQSRKNKHITSVT
NKEEKHNKNNKRPVSQKQRPPLRSNSSKSNFVFQKPTKYSDLSEEDNSDL
DEPGIVRIVIQHKDAPTRVKTSAKTWNNDLPIRLNQDLQRESDVKRMNDL
IKKLTISKPPSTHNSTQTLQQDKSTFDGGLYCRIESKVRNSLQSNNVHSS
NSLTNTSTHAKGHKYK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002830XLOC_002830Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004992TCONS_00004992Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021777DUF3342
IPR011333SKP1/BTB/POZ
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D4.10.1130.10coord: 293..430
e-value: 4.5E-6
score: 26.5
NoneNo IPR availableGENE3D3.30.710.10coord: 21..176
e-value: 7.1E-9
score: 35.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..448
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 542..566
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
IPR021777Protein of unknown function DUF3342PFAMPF11822DUF3342coord: 35..133
e-value: 1.8E-32
score: 111.3
IPR011333SKP1/BTB/POZ domainSUPERFAMILY54695POZ domaincoord: 27..139

Blast
[Close]
BLAST of TCONS_00004992-protein vs. Swiss-Prot (Human)
Match: K1841 (Uncharacterized protein KIAA1841 OS=Homo sapiens GN=KIAA1841 PE=2 SV=2)

HSP 1 Score: 334.724 bits (857), Expect = 3.137e-106
Identity = 168/347 (48.41%), Postives = 233/347 (67.15%), Query Frame = 0 
Query:   19 NCKSEKK----------SESQKKMDITIHVCDEAKNLKKDFSCPKSLLLEEMKYFQDYLSSDHQTWEDIDISVHCDVKIFDWLIRYVKRD-KENQD-SGPILSAKSAVSILISSEFLKMAKLVERCITFCHDHMSEIIASPCNMNCINDPLVKRISATFTQHDLEQVIDKKDKFKSKLFCKKIEELFNPNFSNEYSHNNASKLYKCLHCQKLLLPPVEQSIKCTVARTMIDHHGNLQYVHSRDTTWDVQEYLQNLKQQFKTWRSVFWRVWSVINFLQCNHCDEVFPVSDYNCCRYHPQQPIR-------NGTQAIAYPCCDQKSFHFEPIKSKNGCKFGNHQVSFKD 346
            NC SE +          +E  +  ++ IHVCDEAKNLK+DF+CP+ LL+ EMKYF +YLS D Q WE++DISVHCDV IF+WLI+Y+KR+ KEN+D   P L   + +SILISSEFLKM  LVE+CI +CH +M+ I+A+PCNMNCIN  L+ RI+  F+ ++++ + DKKDKFKSKLFCKKIE LF+P + N  S +NA+ LY+C  C+KLL    E+ I C   +  +D  GN+ Y+H RD TWDV EYL +L ++ K+WR V+WR+W  IN+L C+ C + F   +++ C+YH +  +        N      YPCC+QK   F+P +   GCK  +H V+ +D
Sbjct:  122 NCSSESENCTTHNGGEMTEESEGPNMVIHVCDEAKNLKEDFTCPRDLLISEMKYFAEYLSMDAQRWEEVDISVHCDVHIFNWLIKYIKRNTKENKDCEMPTLEPGNVISILISSEFLKMDSLVEQCIQYCHKNMNAIVATPCNMNCINANLLTRIADLFSHNEVDDLKDKKDKFKSKLFCKKIERLFDPEYLNPDSRSNAATLYRCCLCKKLLTKETERRIPCIPGKINVDRRGNIVYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTINWLTCSRCYQAFLCIEFSHCQYHSETVVYPTAASSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVTLRD 468
The following BLAST results are available for this feature:
BLAST of TCONS_00004992-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
K18413.137e-10648.41Uncharacterized protein KIAA1841 OS=Homo sapiens G... [more]
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