TCONS_00004831-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004831-protein
Unique NameTCONS_00004831-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length188

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004831-protein ID=TCONS_00004831-protein|Name=TCONS_00004831-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
MYIAESINEETCQQHLNVAKASPHHLSPRRCLKQDAMVSSRPRARSESLT
SNRHKRSSSVDLKKHVNNNTKTNKPTSNTNLSPLTPASLLCYTVINRDEI
LLQKLLSQYQNKVNELSEEGLTPLHLASMDGNTDIMRILFQHGASLDKVD
FNNRSALEYAVLSGQFDAAQFLIENGCDTSLIRDGYSF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002740XLOC_002740Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004831TCONS_00004831Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 99..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..80
NoneNo IPR availableCDDcd00204ANKcoord: 89..187
e-value: 5.25405E-17
score: 72.4162
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 168..182
score: 24.96
coord: 120..135
score: 42.01
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 119..148
e-value: 2.6E-5
score: 33.7
coord: 152..181
e-value: 0.77
score: 18.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 152..184
score: 9.431
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 119..151
score: 14.239
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 101..179
e-value: 6.8E-14
score: 52.1
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 46..187
e-value: 2.6E-24
score: 85.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 104..184
score: 22.331
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 75..180

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004831-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top