TCONS_00004617-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004617-protein
Unique NameTCONS_00004617-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length247

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004617-protein ID=TCONS_00004617-protein|Name=TCONS_00004617-protein|organism=Clytia hemisphaerica|type=polypeptide|length=247bp
MFARAPFPYRFHTRRGRSRRRHGKPETNRNIPSAFFGLVVTGLYAITMAE
PNWFELDGGICSGRHIGLYTIFGMNIRLIKGKCITDGVILKLRLCASFAL
LGVISSMFQFALDVCGSNRTGLKCLRRNSIGNILSVLYSVVILGLSYWIT
LDISQLELKTYTGEIIPISCKFAVAFYLVIGAGLAALIATTFSLMEITCE
RRRRQHRDRRILNGSDMQLELICDGTEESSMTVFDDLPPVAPPMYQE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002604XLOC_002604Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004617TCONS_00004617Clytia hemisphaericatranscript
Blast
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BLAST of TCONS_00004617-protein vs. Swiss-Prot (Human)
Match: TM127 (Transmembrane protein 127 OS=Homo sapiens GN=TMEM127 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.766e-28
Identity = 61/173 (35.26%), Postives = 97/173 (56.07%), Query Frame = 0 
Query:   26 ETNRNIPSAFFGLVVTGLYAITMAEPNWFELDGGICSGRHIGLYTIFG-MNIRLIKGKCITDGVILKLRLCASFALLGVISSMFQFALDVCGSNRTGLKCLRRNSIGNILSVLYSVVILGLSYWITLDI--SQLELKTYTGEIIPISCKFAVAFYLVIGAGLAALIATTFSLM 195
            +  R++ SA  G +        +AEP W  + GG CS + +G+  + G ++  L+K  C+    +L LR+ A+F  LG++ S+  F LDV G     LK  RR +  +IL+VL    ++G SYW +  I   Q + K Y G  + ++  FAV+FYLV GAG A+++AT  +L+
Sbjct:   26 QPERSLASALPGALSITALCTALAEPAWLHIHGGTCSRQELGVSDVLGYVHPDLLKDFCMNPQTVLLLRVIAAFCFLGILCSLSAFLLDVFGPKHPALKITRRYAFAHILTVLQCATVIGFSYWASELILAQQQQHKKYHGSQVYVT--FAVSFYLVAGAGGASILATAANLL 196
The following BLAST results are available for this feature:
BLAST of TCONS_00004617-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TM1271.766e-2835.26Transmembrane protein 127 OS=Homo sapiens GN=TMEM1... [more]
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