TCONS_00002797-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002797-protein
Unique NameTCONS_00002797-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length681

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002797-protein ID=TCONS_00002797-protein|Name=TCONS_00002797-protein|organism=Clytia hemisphaerica|type=polypeptide|length=681bp
RTNFILGLLLFVVTIATMLNPAECKKGKGPKGKDKGPKGRDRKSRKKFKL
EPKKYLWDIGYSSDPEIETEDPILDYQDFFGLPLTGQLDYVTMRTMEQPR
CGMTDPIERFKDKKYGKGKGPRRGRKGGKPKKYRIHRGKRFLQQGTSWLP
LFEKTGENKLKWTLLTTGTQLLSRDEVLIETRKAFQFWADVTNLIFEEVS
LEDVDKKYAKDDIEILVSFGNEDHGDPYPFDGQGGTLAHAFYPLSNDGLS
GDVHFDDDEDYTIQSEQGTNLLWVATHEIGHSLGLEHSNVNGALMYPVYT
GYRPDFSLNIDDILGIQSLYGIKETPTTTTITLPTTSTTALPTTSTTAPK
TTTTAPTTTMTAAPITTTTTTTTPTTTTTLSTTTTPKPPMTTTTTTTTST
DPITTTTTTTTTTTPPKTTTTPDPVPPVTKPKCPRSLRPHASYYNKNTQT
INLFTRDRIIIYHNDGRLTEGATFSPQDKRNFISHRMASTQIQYKGETVE
LRFVGRSYFIIKDSEKPTGPFTYHAMKKPKGRKGPKGRKGSKGHKKNSRK
GKKEKKKPDSKLSNPLNIVLPRNHIVTAATVWKDGKLYLFATSRYYTHDL
RKGKTHEKNHTLKHLVKRYRLKSINAAFWNEKKGHLVLFSRSSNYFYILH
DRPKRRQKRVERKSLHKELRKIPDNKRYCRL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001525XLOC_001525Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002797TCONS_00002797Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021190Pept_M10A
IPR006026Peptidase_Metallo
IPR024079MetalloPept_cat_dom
IPR001818Pept_M10_metallopeptidase
IPR000585Hemopexin-like_dom
IPR033739M10A_MMP
IPR002477Peptidoglycan-bd-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Cellular Component
TermDefinition
GO:0031012extracellular matrix
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0031012 extracellular matrix
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021190Peptidase M10APRINTSPR00138MATRIXINcoord: 96..109
score: 43.38
coord: 308..321
score: 65.51
coord: 213..241
score: 55.34
coord: 274..299
score: 65.95
coord: 181..196
score: 46.19
IPR006026Peptidase, metallopeptidaseSMARTSM00235col_5coord: 158..322
e-value: 1.3E-39
score: 147.6
IPR024079Metallopeptidase, catalytic domainGENE3D3.40.390.10coord: 37..329
e-value: 1.6E-57
score: 194.3
IPR001818Peptidase M10, metallopeptidasePFAMPF00413Peptidase_M10coord: 157..321
e-value: 5.7E-48
score: 162.6
IPR000585Hemopexin-like domainGENE3D2.110.10.10coord: 546..677
e-value: 5.7E-8
score: 32.7
IPR000585Hemopexin-like domainSUPERFAMILY50923Hemopexin-like domaincoord: 576..666
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 520..565
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 333..440
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 138..320
IPR033739Peptidase M10A, catalytic domainCDDcd04278ZnMc_MMPcoord: 173..321
e-value: 6.87078E-62
score: 203.975
IPR002477Peptidoglycan binding-likeSUPERFAMILY47090PGBD-likecoord: 47..105

Blast
[Close]
BLAST of TCONS_00002797-protein vs. Swiss-Prot (Human)
Match: MMP15 (Matrix metalloproteinase-15 OS=Homo sapiens GN=MMP15 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.822e-38
Identity = 99/268 (36.94%), Postives = 135/268 (50.37%), Query Frame = 0 
Query:   73 ILDYQDFFGLPLTGQLDYVTMRTMEQPRCGMTDPIERFKDKKYGKGKGPRRGRKGGKPKKYRIHRGKRFLQQGTSWLPLFEKTGENKLKWTLLTTGTQLLSRDEVLIETRKAFQFWADVTNLIFEEVSLEDVDKKYAKDDIEILVSFGNEDHGDPYPFDGQGGTLAHAFYPLSNDGLSGDVHFDDDEDYTIQSE--QGTNLLWVATHEIGHSLGLEHSNVNGALMYPVYTGYRPD-FSLNIDDILGIQSLYGIKETPTTTTITLPTTS 337
            + + Q F+G+P+TG LD  T   M++PRCG+ D                     G + K     R KR+   G  W         + L +++    T+ L     +   R+AF+ W   T L+F+EV  ED+  +  K+  +I+V F +  HGD  PFDG GG LAHA++P    GL GD HFD DE +T  S    G NL  VA HE+GH+LGLEHS+   A+M P Y     D F L  DD+ GIQ LYG  +     T  LPT +
Sbjct:   83 LAEMQRFYGIPVTGVLDEETKEWMKRPRCGVPDQF-------------------GVRVKANLRRRRKRYALTGRKW-------NNHHLTFSIQNY-TEKLGWYHSMEAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKE-ADIMVLFASGFHGDSSPFDGTGGFLAHAYFP--GPGLGGDTHFDADEPWTFSSTDLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDVDNFKLPEDDLRGIQQLYGTPDGQPQPTQPLPTVT 320
The following BLAST results are available for this feature:
BLAST of TCONS_00002797-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MMP152.822e-3836.94Matrix metalloproteinase-15 OS=Homo sapiens GN=MMP... [more]
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