XLOC_044335 (gene) - C. hemisphaerica

Overview
NameXLOC_044335
Unique NameXLOC_044335
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_60:312546..320043-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044335 ID=XLOC_044335|Name=XLOC_044335|organism=Clytia hemisphaerica|type=gene|length=7498bp|location=Sequence derived from alignment at scaffold_60:312546..320043- (Clytia hemisphaerica)
AAGAAATTTTAAACCGCGTACGACGGAGGGACATAGTATGACGTCATAAT AATCGAAAATCTGTACGGTACCGAATTTTGCTTACACTACCACCAACATC AGCGTGCCAAAAAAGCCGACAAGGAAAATCAAACAGGAATAAAACTTTTC AACTTCTTTACTTTCACANCCAAAAAAGCCGACAAGGAAAATCAAGCAGG AAGAAAACTTTTCAACTTCTTTACTTTCACAAAAGTTTTCACAATGCCCA AGAACAAAGGTATGTTTTTTATGATTATTTCATCATCAATTTTTTCTACA ACTAGTGTCTATGTGTAAAGCGAGAGCACAAATTGCTAAGATAGCAGACA TGCCAACTCTCACACATTGATTGACTGATTGAGCAGGTTGGCAGACGACC CTGTGCCGCCGATGCACTGGACAGTCTGGTGTGTTTTGTCTGGTGCCAAA AAGTATCCCTCAGCCACACCGGAAACCTTTTGTCCGGTGATATTTCCGGG GGATAATTTTGTTAACTTCTGGACACTGGACAAAGTTTGTTTAAAAAAAT TGTGTGCACTGGGACGCACCACCAGGCTTAAGTCTGGTGTTAAGATTGTC CGGTGTTAAAACCTGTCCTCATCCAACACCGAACTTTGCGTGTCCTGTGT TCGTAAAGTCCGGTGCGTCGACAGGGTCGTGTTGGCCACGTGCGTTTGGT TTGGGAACGCGAACACGAACGCAAACTACCCATGTCTAAACTTTTCAATT TATCTCCAGAACTAACAGATTTTTTGAAATTCTGTAAAAAGGTCTAAGTT CCTGAATAGTTTTACTATGTCCTATGAAAAAATCATAAGCANTAAATTTG AATCGTATCATCTAGGGAAAAGAACATTGAAAGAAAGTTGTAGATTGGTT TCAAATTACCTCGAAAATTAAAGTCATTCGGACAGGTTTCTTCCTCTTTC GTTTCGCCTTTGTTTTTGTTTTGATTTGAGAACGATAGAACGCGATTTTA GCTATTTTACAGAACGATGTCATAGTTGATATACTTTAGGTACAACCAAT ATCCTAGACTAGAAAATAGTATTTAGTGCAAATTTAATGTTAAAAATATA CCTCCTTACCTATTTTCAAGCAATAAGATGAATTTTATGAATTAATAATA TGTAATTTAATAAAAATAACATTATTTGAAAAACCTCCACTGACCTTTAA ACGTTCTTGCTTTTTCCCGCCTTTTCTTTTAACAACACGTGCACATTTTT GGCGGGAATGTCATTCATTTGCAGTGCACAAGCCAGCNACCTCCACTGAC CTTTAAACGTTCTTGCTTTTTCCCGCCTTTTCTTTTAACAAAACGTGCAC ATTTTTGGCGGGAATGTCATTCATTTGCTGTGCACAAGCTGAAAGCGAAC GCAGAATGTCAACGGAGCCTCCAAGTAAAGTAGCTAAAATGACTGGATCT GATACAATTTCAAGCACCACAGACAACACAGGTATATATTTATAATAAAA GGTTTATATTCTCAACTTCAGTTGAGCTAAAATCTGAGAATGTCTGTCTG TCACCTCAAGACTTAAAAAAAAAAAGTTGAATTCGGCTGAAATTTTGCAC ACTTGTTCCTTCATACCGTCAACTGTTCTAACTTGGGACGATATCTGGCC TGTATTTTCACTTACTGTTAAATCTTTTGACAACAAATTTGTTTTGATAA TTGTTTTGAGTTACGTATCACTCCACCAAGTTTATCAATCATACTTTTTT TCATAACATGTCACCACGTGCGTTTGGTTTGGGAACGCGAAACACGAACG CAAACTACCCATGTCTAAACTTTTCAATATATCTCCAGAACTAACAGATT TTTTGAAATTCTGTAAAAAGGTCTAAGTTCCTGAATAGTTTTATTTACTA TGTCCTATGAAAAAATCATAAGCATCAGTCAAATACTCGTTTATCTATTT AAGATTGAAGACAAAAATTTGCGAAGAAAAATAAACCTTGAGCACAAAAA ATGCTTTTTTAAACACTATTTTCCACTGAAAAAAAAATAACTTTTACAGA CTNTAAACACTTTTTTCCACCGAAAAACAAATAACTTTTACAGACTTACC TTCCCCAAACATTGAAGAAGCCTCTACTAATTAAAGTAAATGAGATAAGA TAAGACAAAACCTTAAAATCAACCAGAATTTACAACCTTTTGTCCAAAGA AAAAGACGTGCTTTTCTCGCCGCCATTTTGTTTCCGAATGAGAATTCTAG AGAATTCCATTCGTTTCCAGCTCCCGCGGTCTTTTTTCATCCAATCAGAT CGCGCGATTTCGCTTTCTCTAGTCCAATAAGACTGCGGGATTTGAGTCAT GTGACATCTCTATTAAAAACCCGCGCGAAATACAGGGGGTCACAAATAGA AATACAGGGGGTCACACTACTGGCTACAGGAACTGAAAGCAAGCAATTAA GGCCAATATTTTTGGTTTTTCTGAAGGACAAAAGGTATAGGAAGGTATAG GAAGCTTTACTGAAAGAGGGATAAAGCTGGGACAATCTATTTGAAAGATA TGGACATAAAAAAGGCACTTTTTTGGGTGATAATTAAGATTTTACTCAGA AACTTTAAAATTCTCTTACCCCTGTCTCAGGCCCCCCTGATATGAGCAAG GGAACCATGTTGGCGACCCCTACTGAAAATTTCAGATCAAAACAAACAAG GAATTAATTCCTGTAACTCGAAGAAAATTGGAAAAAGCTGGTTTTTGACT GCTTCTGATCCTTAAGTGCAGGTGGCGTTTGCGTAGGGTAAAATGGCAAA ATGCGAAAATCGAATTTGGCAAAAAATTTTTGAAAAATGACCCTACAAGA TTTGACTATATCTTTTTATTCCATGAAGAGATTAATTTCAAATAAAAATT ATATTGACAATGAATGGGTAAGGTTTCTAGAAATCCAAACATAAATTGCA TAGCTTTTACCAAAAAATAGCAAAGTTAAGCAAATTTTCAATCGATCCAG GGATTGAATTAGCGTATCGCATTTCGCAATTCGCGATGCGTTTTTGGATT ACTTTACAAGCTAAAAATTGAAAATTGATCCATTTTAGAATGCAAAAGCA TGCTTATCAAAAAATTGCGATGCACTTTCTATCCCTTATTTCGATGCCTG AGTTCATATCTTTAAGAGACTTCAAAAACCCACTGAGATTTTTTGAGGCT ATAAACTAGACCTACTAAGGAAGCCTTGCTGAAAGTTTCAAAAAAATTTG TTGTTGCAGCAAAAAGATACGCCATCTTGAATTTCACTCCAGATCTGCCA AAATAGCTATTTTTGGCCATTTTTTACGGTTACACAAAGATGGAAATCCT GAAAACGTTATTTTTTTGGCCAAAACCCACCAGTAAACCACTCCAGGTCA AAGGTTTGCTTCAAAAAAGTCTCAAGGACTATCAGCAGCCAGCTAAAAGT GCTTCCAAACCCAGATTATGCAAAGTCTGAACCCCCCTACAGGAGGTGTT AAAGATTTTCGGGGGAAATTTTGGAGACTCAATTTGATTTTTTCTGATTC CCTACAAAAAGTATGTGTACTTAAAGTAATGTACTTAAAAATAAAAATTC ATTGGCTTTCAAAATCTGCTCCTCAGATTTTCGCTTAGGCTCTGGGGGCC ATGTATATTTTCCAAATTGAATATTTCAAAATATTTCAAATTATTGCCAT TGGATTTTTTTGCCCCAGGGCCCAGTCCCATTCAGTTTTGATTCTCGTTT CTTTTGCTATATTTTTCAAATGCGATTGTTTTGATTTACAGCTGCCATCT TTATAGCATAATAACAAAGCTGTTCTCATGTGTGTGCGCTTCCTGCACTA GCATAGATAAGGTAAAACCTCAGGATAAGAGTAAACAAACATGGTACCAT GGTTTCAGCCCACTTTTCTGGTGCCCCCATTGAAGCATGGTGCCCCCAAC GAGTTAGGTCCCCTTGAAAAATTGCTTTGAGTTAGGTACCCCTATTCAGC AGATAATTTCTTTGAATTGACACTTACTTTTGATACTTTTGATGGGTTTT TTGAGTCTCTCAATCATCCAATTTGGAAATCCGATGATAAACCATTTCTC TCGCACTGTTTGAATTCGCTCTCCTGTAGGGATAATAATTCGGGAGCAGT GGTTCGTCCGGCAGTGTGGAAAGAAAAAGGTCAAGTTGTTTTTTAAATTT AAAATTTTTGTGCAGTTTGTGATATTACGAATGTAGAATGGGAGAGAATT GAAAAGCTTAGGTCCTTCTTCAGATAGTGAGCCTCTCCAAATGTTTTTCT GTTTAGAATTTACTTCTTTAAGGTGGCATTTTCATCTGAGCCTCTGGTTT TCNNTGGTGTCTCTTGGATGGTGACCATAGCTGTGAACAGTAATCAATGT GAGGGACTGCCAATGTCTTCCATAGGGTCAGCATTACAGTAGGGTCCCTT GTTTTGAAAGTCTGATATATCCATGAACTGATGCCTTGACTTTGTCGATT ACATTTTCTATATGATTGTCATATGTCATACCCACATCTAAAGTGATCCC AAGGTCTTTGACTGTAGTCTTGGTCTCTATCACCTTTTGGGTACCAGAGA AGTATTCATTTCTACTATAATTGAGATGTTCAAATTTAAGTCCATTCAAT TTCAGATTATTCAATCCAGTCCATTCATAGACTGTGTTCATGTCATCTTG GAGCTGAATGATATCAGCATGGTTTTTGATTTCTTTCATTAGACGTGTAT CATCAGCAAATGATGATAAGAAAGAGTGTAATATCTTTTTGTCAATATCT TGTATCATTATCAGAAACAGTAGAATTGATACTTTTTGTTCTTTTGTCAT TCCAAAAATCTTAAATGAATCTTAGTGAAACAGAGCCAAAAAAAATTATC TGCTGAATGGACTTAACTCAAAGCAATTTCTCAAGGGGACCTAACTCGTT GGGGGCACCTGAAAAGACGTTGTGTGAAAAATTTATTTTGGAGCTAAACA AACACATTTTGCCTGCGAGGGGTTGGGCAAGTTGGTTTTCAGATTTTAAC TCTACTTGGCTATCTTCTAGGCTATTACTTTAAAAGTACACTGTTAGATT TCAGTGGATTGCACTATTGCTCGAGGAATGAAGGATTTCAAAAATTTAGG CTACCAATCCACCAACCCATTTTTAAAGCTTCTAGGAACGAACCAAGCAA ACAATAGACCTTATCGGAGTTTTTAATTTTTCTAAAAAAGCGATGCATTG TGGGATTGTTTCGAGTGTATTAATTACAATAGAATTCCCTCGAGGAATTC CTAAGAGATTTCTATTGTAATACACTCGAAACAATCCCACAATGCATTGC TTTTTTAGAAAAATTAAAAACTCCGATAAGGTCTATTGGGCCTGTCCTAT GGAGTAGTGCCACTATTGGGGTGCCACTTTCAGAATGTCAAAAAATAGGT AGAAAATTAAGCTTAAGATCATTTTTCCTAAGTTCTTTTTTATTAAACCA TAGGAAAGGGAGGTAAAAATAGAAGAAGAGGAAAGAATGAGAACGAAACT GAAAAGAGAGAATTGGTCTTCAAAGAAGAAGGACAAGAATATGCACAAGT TCTTAAAATGTTGGGAAACGGTCGTCTAGATGCCATGTGTTTTGATGGTA CAAAAAGGTTATGCCATATCCGGGGAAAACTGAGGAAGAAAGTTTGGATC AACACTGGTGACATCATTTTGTTGGGCTTGAGAGATTACCAGGTAAGAAT TTCAGAAACAAAAAAGTCAAACATTTTAAACTTTGTATGCACATCAAATT CTGTTCATTAAAAAATAGACACGCGGGTTTTGCTGATGTTTTTTTTCCAT ACCGCAAAAAATACCCACATCAAAGTGCTTTTATCAAGGTAGGAAACCCT GCCGATCCGTAACTATTTTAACCTTCCCTCCTTAGGACAATAAAGCTGAT GTTATCTTGAAATATACACCAGACGAAGCTAGAAACTTGAAAACATACGG CGAATTGCCTGATAATGGTATGTTAATTTTGCATGTTTCCTTCTGATTTT TTGCTCTTCTATTTTTGGACCTACCTCGGAGGTCCTTTAAATTAACCTCT GTTCGTTCGTTTGTTTGTTCGTTCGTCTACTATTACTACTTGCTTTTCTC GGGATCTGCCTATTAATTTTTTCTGATGTAAAACGAGAGTACCCAAAAAG TATATATTAAAATAAAAACTTGTTTAACATCTTTTTAGTCTCATTTTGTA CTATTGCAGGGGGGGTCAACATTTATAATACCAACCCATAGCCCAAAAAC CTGACTTTTGACCGTTTGAGCTAAGTTAACACCACCACCCCGAAATTGGT ATCGATACCAACTTGAAAATCATAATTTTCAGAAAAAGGGGGGACCCACC CCCTTATTTTGGTATCGATACCAACTTGAAAATCATAATTTTCAGAAAAA GGGGGGACCCACCCCCTTATTTTGGTATCGATACCAACTTGAAAATCATA ATTTTCAGAAAAAGGGGGTACCCACCCCCTTTATTTGGTATCAATACCAA CATGGCTTCTTGAATTTGACAAAATATCATGGGACCCACTAATTTAGTAC CAATTACCAATCTGACAAATTTGAGTTTAAAGCTGTTTAAAGGGGACCCA CCCCCTCCCACACAAACAGGGTACTAAGAGAAACTCNTTGTTGTTCCTCT CTTTTTCAGTGAAAATTGAGTCGAACATTAACAACGAGGATGCGAGTGGA GATATCGAATTCGAATTTCAAGATGACAGCGAGGAGGAAGATGATGACTT GGATGACGTAAGCAACTTTTTATGTTTGTGGGGATTTTCTTTCCTCGAAC GTGTGGGGATGAGATGGAGTTTTTACAAGCTCTTATTTGATTTGGTTGGT CGTTAGCCAGTAATAAAACAATTTCGTTACTTTTTCTAATGAACGCGTCA TTTTTATTACTTCAAATGACCAATCATTAAGGTATCTTATTAAAACTCCA TCTCATCTGAACGTGTGGTATTTTCGAACTACTCAAAGGACCAATTGAGC GAATAGTGGAAAAATAAACTCCCTAGCGTCAAAAATCAGGATTTCTAAAA AATGAAAAAAGGACTAGGTCCAGCTACTCACCCACGCAATAAATGTCTCA GACTTTCAGCCAAAACTTGGCCTCGCTTTTGCGAAAAACTCGCCCTGGCA CACAAATCCAAAACTCATTTCTTGAAGAAATAAAAATTATTTTATTCCTT TCGCAGATTGACAACATATAGATGGATAGGTGGCCTTGGCTGATTCCATA AAATGTCGATATCCTCAGCATAATTCCAAGAAGATTTTGATAAATCGAAT CTAAAGAACGATTATCATGAGAATTTTTGCTGATCTAGCACAATTGAGAG AAGGAGAAATGAGAAACGATTTTAAAAACGTAGTTGGATAAAGTGGAGCT GGAATATCCACGTTCGAAGGTGTAACATGGAAATTGAAAAAAATGANN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071342TCONS_00071342Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071342-proteinTCONS_00071342-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:312546..320043 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
EIF1AYeukaryotic translation initiation factor 1A, Y-chromosomal isoform 1 Homo Sapiens
EIF1AXeukaryotic translation initiation factor 1A, X-chromosomal Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
344.86 369.28 140.28 105.17 357.72 282.64 429.95 445.71 366.91 319.56 305.43 288.35 309.93 345.39 251.7 265.14 287.9 286.03 181.23 225.35 301.46 294.04 283.76 278.46 312.46 318.14 362.92 389.14 277.38 269.57