XLOC_043058 (gene) - C. hemisphaerica

Overview
NameXLOC_043058
Unique NameXLOC_043058
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_493:161518..169397-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043058 ID=XLOC_043058|Name=XLOC_043058|organism=Clytia hemisphaerica|type=gene|length=7880bp|location=Sequence derived from alignment at scaffold_493:161518..169397- (Clytia hemisphaerica)
TTAGCTATCATAATTACTAAAAATAATGCCTTCAAAGAAAAGCAAGCAGA ACAAGCCCAATGGATTTGTTCTTTATGCAAATGAAATCAAAAACCAATTG TTGAAGGAAGGTCATTCGATTCGTAACATGCCTGATTTGATTGCTGCTGC TACCCCTAAATGGCAGGTATGTTCTTTTTTACCTCTTATCACTTTATTTA AAAAAGGGAAGAAAATTCACATTCTTCAAGTCGTTGGGCATGATGTCAGA AGTGGGGAAACAGAACACTTTTTAAAAATTAATTGTGTATTTTAGTACAC AAAACCTTTTAGTGAGTTAAACCATTCATAGTGCTTGATAGCCCTTACAG GTAAAGGGACCTCAAAATGCAGTGGGACCTCAGGATGTCAGGTTTTGAAT TAAGTTGAATGGAACTCAAACTTTTCTATTTAAACTAAAAATGACAAACA ATATGAATAAAGGGTATAATATTACATAGTAAAAACAAATTGTATTACTT GCTACCCTAAAGGAGCATCCTAAATGAATAAAAAGTCAAAAAAGTTTCAA AGACTTCAACAAAATTTTTGGAATTAATTTTGAATTCTGCAACTCCTTCT AAAAATAAGTTTGTAAAGCGTTATGAAAAATGTTCTTTTAGGACTCTAGA AACATGGTAAAAAAGATGGTTTCTCAAAGTTATTACAATTTCATTTAAAT AGACTCCAAAACCACCTAGCGTTTTGAGGTGCCAAACCTAGCGTTTTGAG GTACAAAACAAAAACGCAAAATCTTCTCTTGAATCTCCTTTGAAATTGTA ACAAATAACTCTAAATAACTATATAATGAATAAAGAACTATAAATGAATA AAGAATATGAACATTTTTGAAATTTTAACAATACATTTAAAAAGGGACTG CAGAATGCTAGGTAGTTTTCTTGAAAAAAATCAGTCANNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTATCAT TTTCTGGCAGCTTTCCCCTCGCCCAGCATATGCTAAACCATTTGGAGTAC CATCTACTCCATAGTTTACAAACTGGGGAGTTTCATCATGATTGAAAACT CTTGTTGTATCAATATGCCCCTGCCAAACACCAGTTTCTAATTGGACTGC ATCAACAAAAATATCAGTTTTTATAAGCTCTTCAGCTAATTCATTCAAAT GGTTACAAGCCATTTCTCTTGTGCAATTTAAAGCTCGATTTATTGATACA GTCCCTTGTCTTTTCTTTGTGATCTGCTTTTGATACTTTGAATCCCAACG CCTCCAAAAAGATTTGCTAAGCTTTTTTGTTGTGAGTGCTCGTAGTGCAT TTGGGGATAGTTTCTTGATGTTACGTCCGCGAAGGTTTTTGTAGGCATGC TTTCTTACTTCCAGAACATTGAGCATTGTCCTTGTCAACTCTGTTTTGTT CAGTCCTTGGAGGCATCTAAAATATATGAAGTTTAATTATAGAGGATTTC AATGTTTCTTGGAACAAGAAGAGGAACTACAGGAACTTAGGAAAGATTTT CCTTAATTCAGCAGAAATGAAGAGAAAAAGGGATAACTTTCCAAGTCCAG TGTATGTTGACGTTTCGTTTTACATTTAATTATTTCCAAGCTTTAAGAAA TATTGCCAATATTGAATCTTACCTATTTTTGTTCTTTATATATTGAACTA GCGACTCTTCTTCCTCTGTGGTGAATATTGAGCAATACTCCTTCTCTTTT CCAGTCTCAATGATACCATCAAGCCGTGCATTTATTGTTCTTAGATCTTT GACTAGTGGAAATTTTCCTGAATTAACTGCAGCCCAGCCACGTTTTTTGT TAACTCTACACCATTCAACTGCCTCCTCAATCTGCTTACTTTTCATGTTT ATGTTATCTCTTAAAACACTGCATCTTGATTTGCTGGTGGGTTTCACTCT CAGATTGAAAGGCTTACCCATTTCTTATCTATATTTTCTCAATTCTTTAC TCTAGAGGAAGATCAAAACTGCAGTAAGTTAACATATTAAGCTAGATATC CATCTGTCATGCATATTTCTTTACTAAATAGCTAAAAGCAAAGAGAAGAA GGAGAACTCTGATTTCTATTATTCTATTTCAAAGAACTTTCTNAAAAAAT GTATATTTAGTTTTATTTACCTAGCATTCTGAGGTTCCTTGACCTAGCAT TTTGTGGTGAAATAGAGAAAATTTTAGGCATAAAAGAACCAAACATTTAA AATATACTCAACATTGAAAAAAAAGGTGTTATGCAAAAAATTGTCATTAT CTAAGCAAAATTGGCAACATTATTGACTAATATGTGACCTAGCGTTTTGA GGTCCCTAAAGAAAAAAGTATATATTAGAACATTAATTCAAAATGTATGA AAACTGTATCGAAAAAGTTTTCAACCTTTTTGGCATTCAAGCAGGTATAT TTTCCAAACACTTTAAAGAGAAAACCAAGTGTCTGGCTAAATTTATCAAC TTTGATGGGATCTCAAAAAACACCTAGCATTCTGAGGTCCCTTCACCTGT AGAAATGATGAAATCTTATCTGTTGAAAAGCGCAACAGATGACTTGTGGC AAACAATTCATGATATGCACCACTGGAGAGTCTTCTGAGAACTTTCCAAA TTTTCCACCCAATACGTCACTCTTTTTATTTTTTATATTTTAAGTGCTTT ATTGGGTCTGATTGGGTGGAAGATTTTAGAAGACTCTCAAGTGGTGCATA TCAAAAATTTAAAGGAACTTTTATGATCTACTCAGAGAAAATTTTGCAAA TGTTTATTCTTGTTAAAAAATACTGCGGCCATTGTATTCTTCAGAAAAAC TAATAATTTTGAGATATCTTCAAGGTTGATGAGTGTGAATTAAAATTTGA TCTTATAGCCCTCTAGAAAAAAATATATAAGTTTTTTTATGGTAGTTTTT TTAAAATCAATTAGCAAAATTATTCTTGGTTATTCTCCTTTTAAGAGAAC TTGTTATATTTTTGCCATCATTTCTAGCAACTTCCGGATGACGAGAGGGA ATATTACAAAGAGAAAGCTAAATGGGAGTGGGATAATCGTCACACTACTG GCAAATTTCAATCTAGATCAAGGAATCATTTTGATAACACAGGTGCCCCC GTTACTGTAAGTCATTACCGTTCACCAATATTCGGCTCAATGAATGAAGA CAATCACATAGAAATAGGCTGTCCATTTCTAAGAAAACGATCTTGTGTTG AATGGGCTGTTCCATTTAAAATCCATAGAGGGGGTGGAAGAACCTTAACC AATAATTATTGAAAATGTGTGGATGAAAAACCCTTGGAAAAATTCTTCTT CACACCTTTAAAGTGAGGGTGGACAAATATAAAAACCAATATTTTTTTAT TTTATTTTTTAGTATATTTTTTACCCCCTGGATAAACCTTTCCTCAAACC CCCTGAAAATTCTTCTTCTGATTACCCCCTGGAAAGTTTCGTCCGCTCCA TGAATGAATATAAAATGTAACGGCTCATATTTATGGAAGGACATCACTTA TGGAAGGTCAGTCCCCAACCTGGATTCTTGCAAAAAGTCATACTTCCCTA GAATTTTCTGACAATTTCAGAGTTACACCATAAATTTTTCTCTAAATTTT TGAGACCTCTTAGGGATTTTTTCGCTGGCACCAGCTGGCACCTCCCCTGG CCTGCCTACTTACAAAAGGCACCCTCTTCATAATTGAGAGTGACATTTTT TATGGAATAGCACATGGAATCTTTTTTAGACTTCTAAACTAAAGAACACT TTTAAGATAATGAAATTTCTATTCTCTAAAACAGTTTAAATTGTTTATTT GAGAAAACTAAATGAGTTTCACGTCTCAACTTTAGGATGTTCTCTAATTT TTGGAATAAAGAAAAATCATTTTTACCATGTTTTTTTTTTACGTAATACA TTACAGGAACGTGTGGATCTGGTAAGGGTTATGGAAGTGAAACGCGAAAA GGAGCGACAAGAAGTTTTCATGAGTTTTCTACCAGAAAGAGGTAAAAATT TATTCTACTTTGGTTTGATATGTTACCCCTATGGGAGGGCGTTGGGGTCA GGCTTCATTAGTTTACTACTGGATTTCCCTGCGAGATTTTAAACACCACA AGTGATTTTTAAGCTCATTAAACTACATTTGGTTTGATATGTTACCCCTA TGGGGGGCGTTGGGGTCAGGCTTCATTAGTTTACTACTGGATTTCCCTGC GAGATTTTAAACACCACAAGTGATTTTTAAGCGCATTAAACTACATTTTG GTTTGATATGTTACCTCTATGGGGGGCGTTGGGGTCAGGCTTCATTAGTT TACTACTGGATATCCCAGCGAGATTTTAAACACCACAAGTGATTTTTAAG TGCATTAAACTACAGTTGGGAAGTAGAGTTTTAACTCTGAGTTTTAACAT GAGACTTAAGACTTCGAGCTTAGTATCTCAGGATTTAAAAGCTCAAAATT TGCTCCAATAAGGCTTGGAATATAGCCTAGAAGCCACCGAACCCCTCAAA AATCGAAATATTCAATGAAAGAAAGTGGAAGTGCTAAAATAGCAATTTCC GCCGGAACTTTAAATTCTGAAAAACGTTAAAATGCACTGAAATTTCAATA TATTTCGACCATGATTGTAGTTACTTCTCTTTTGGTCTATTTCTTGAAAG TCAAAAATCCCTGTCAAAATCCATATCTTTTTTGATTATACACTAAAGCC TGGTAATTCATCTGGAATTGTGTTCTCTGAAACAATTAAGGTGGGAAAAT ATTATTATTATTTGTTATTATTCTTTCACTTTAAAAGGCGTCTTGGACCA AAAGTTTTACTTCGTATCTTTCATCTGTCTTCTGGAGGAACCGAAATTTC AACCCATAGAAGTTGCAGCGACCGAATTCAGTTTGTTGGGTGGTCGCGAA CGAAGTTTCCACAGACATTTAAATCCAGGTTTGATTGCCTCATTTCCTTC TCATTGTTTGCATTACCTTAGGCTCTGGTAGGGCATTGCTCACAGTTTTC TAAGCAAAAAGGTCTGTTTTAGATAAATGAATTTTTTCAATTCATAGTTC GGACCCCCCCCCTCCGAAAAAATGGAGAAGGGGAATCAGAAATTTTCATG AAAAAGGGGGTGATAGCAAGGAAGGGGGGGGGGGTAGTTTAAAAAGGGGG GTTTGCATGTATGTTGTAGATTATTTCAAGCACACTGTTATGAGATTTAG TTTCAAAAAGAAAAAAAAAGTTTATTATTTCACTCAGTTTCACTTCCTCT CTCTAAAGATATTTCACATATATTTTTTTTCGGCTATTTTTGTCGAAAAT CCATGGGGGATAGGTATTTTTAAAGGTCGGGGATGCCAAGAAGGGGGGGG TCATTTAAGAAGGAGGTCACACCCCTTTCCGCACTAAGCAATTTGATAAA AAAACGCTTAACAAATTGTCATCTCTAACTATAAAACGATTGAATCTTTT AGAAAAATACGAGCGTGGACTTTCTGATTTTACTTTCTTAATTTTTTTCT TACGTCCAGGACCAATTCCTCAAGGTTACCGTTTCAAGGCACAACAACAC AGTAAGTTTTGATTTTGTGATTAGCGTTGTTGGTAAGATGTTAAAGAGTT TTATTTTTGTTTTTAGATTTTTAAGGAAAAACGATTAAAGTAAAATATAC AATCAACCTTTAGCCGTGCGGTTGGCTTTTTAAGAATGGTGTTTTTCCAT TTCATCATGGATATTCTTAACCTTTTTTGGGGGGAAATCATCATGAAACA TTCTTACAACATTCTTAGATTTGGATCCAAAGCCAGCAAAAATCTAACGT GTAATAAAACATACCTCAGGCAAAAATTTGGCATTTTTGTGGAACCTTTT AGCATTGCTGGGGAATAATTGACAAGTTGATGGTAAAATGTTCTATAAAA CTGGCATTCTGAGGTTGAGTTAGCCAAATTCCTTGATGGTGATATTCTTA CCATGTTCTTAATTTTTTGGCCAATTTCATCATTAATATTCTTATAAAGT ATATTGTATTCACGTTACTTGATTGCTTCCATGTAAGGGTATCTGACACG ACCACTTCTACACTTGTGTTTCTATACCACCGTTAAGAAAAATTTTCTTT GTATTTTCGTCACCAGTCTCACAAAAGCTGACCGTGCCACTAAGAGTTAA CAGATGTATGGCACATAACAACAAAATGTCCAAAGATACTAACTAATCTT CTAAATTGTCAATCCTATTTCCAGGTGATCTTACCCACAAACTTCCACTG ACCGGAAAGATGCAGCTGGGAGATGATTACACCAAAATCTATGACGAACT TTTTCATTTTTTATCGAAAGGAGGCCGACATATCCCTCCTATACACGTGA AGGTACTAACTGAAAAAAAAATTTATTGGTAAAGAGAGAGATCAAATGTT TAAGTACATTTTTTAGTTTTTTATCGAGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069099TCONS_00069099Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069099-proteinTCONS_00069099-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_493supercontigscaffold_493:161518..169397 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
39.41 37.5 11.48 9.33 32.29 26.4 26.88 35.08 16.39 24.53 14.76 12.66 15.59 15.45 15.9 17.91 23.21 20.08 12.93 18.6 13.97 14.97 34.58 32.56 18.77 22.46 22.24 20.21 36.99 38.11