XLOC_039606 (gene) - C. hemisphaerica

Overview
NameXLOC_039606
Unique NameXLOC_039606
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_384:110060..112961-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039606 ID=XLOC_039606|Name=XLOC_039606|organism=Clytia hemisphaerica|type=gene|length=2902bp|location=Sequence derived from alignment at scaffold_384:110060..112961- (Clytia hemisphaerica)
GTCGTTGAAAAGCCATCCTTCGTTAAAGAGTCTTTGATTGCTAAAAGGTT
GTTCGTCAATGAAGATCTGTCACAAGTATTGTTCGCAGAGCCAATAAATG
ATGTTCCCATAGTTTCGTCTCGCGTCGTTGTAGAGCCAATGCACACTGTC
ATCGTGGAGCCAATTCAAGTTGCTGTTATAGAGTCGATTCCCGTGGTTGA
AGAGCTGATTGAAGTTGTAGGCGAGCTGAAACGTGCAGTTATCGTCGAGC
CGTTGCACACTATTGTCGTGGAACCAATCCGCATGGAATGTTTCAGCCTT
GTCATTGAATCAAACTTGTCATTTGTTAAAGAACCGTATTTTCCAGCTGG
TTTGGAGGTAACGCAACGTGAACCTGTTATCGAATTGAACGATTTCGAAA
TCCCCGAATGTTCAATTGTTCATGATATGACTGAAAAGTTGCTTTTGATA
CTTGTTTTGCAATTAGCCAATAAATGGAAAAGTGTTCAGATGAACTTTTA
TGGCCTTTGTGATTTGGATTTACGGTATCGAACATTGAGATTATTTGGTT
TTCTGATTTCCAGATTTTGGTCAAGCAATATGTCACTATACTTGACGGTG
GGGAGTGTAACTACCTTTTAGAGGCAGTTTAAATTTGTGTTATGTTTTAT
TGTTTTGTAAACTAGCTCATTATCGTTTTATGTCACTCTCCTTCGATATT
GCATCTTTGGTGTGTTGGTCTTCTCCTGTGTTTGTACAGTTAAGTACTTT
TATTATAGTAATTATCCTTTGTATATAGTATTCTCAAATGTATTTGTCAT
GTCCCTAGGCTATTGAGCTAGTGTGTCAGTAGAGAGCCGTTGCATGTAGA
GTCGTTTCATATTGATGATTCATTTGTCGTTGAAAAGTCATCCTTCGTTA
AAGAGTCTTTGATTGCTAAAAGGTTGTTCGTCAATGAAGATCTGTCACAA
GTATTGTTCGCAGAGCCAATAAGTGATGTTCCCATAGTTTCGTCTCGCGT
CGTTATAGAGCCAATGCATATTGTCATCGTGGAGCCAATTCAAGTTGCTG
TTATAGAGTCGATTCCCGTGGTTGAAGAGCTGATTGAAGTTGTAGTCGAG
CTGAAACGTGCAGTTATCGTCGAGCCGTTGCACACTATTGTCGTGGAACC
AATCCGCATGGAATGTTTCAGCCTTGTCATTGAATCAAACTTGTCATTTG
TTAAAGAACCGTATTTTCCAGCTGGTTTGGAGGTAACGCAACGTGAACCT
GTTATCGAATTGAACGATTCCAAAATCCACGAATGTTCAATTGTTCATGA
TATGATTGAAAAGTTGTTATTGATACTTGTTTTGCAATTAGCCAATAAAT
GGAAAAGTGTTCAGATGAACTTTTATGGCCTTTGTGATTTGGATTTACGG
TATGGAACATTGAGATTATTTGGTTTTCTGATTTCCAGATTTTGGTCAAG
CAATATGTCACTATACTTGACGGTGGGGAGTGTAACTACCTTTTAGAGGC
AGTTTAAATTTGTGTTATGTTTTATTGTTTTGTAAATTAGTTCATTATCC
TTAAGTACTTTTATTATAGTAATTATCCTTTGTATATAGTATTCTCAAAT
GTATTTGTCATGTCCCTAGGCTATTGAGCCAGAATTTGTAAATGTATAAA
ATGTGTTGTGATATTTGTAGAAGCTTGTGTAGTGTTTATGTGACGTGATG
TGATGTAGTGTTGTGCCACAGTGTTTTAGTAAGTTTATTTCTTGTACATA
TTCTATTCTATTCTATTTTGCTATGTATAGCTTATCTGTCTATGTTACCT
ATTGACTTGTGTTTAGAATCTACTTTGTATTCTTATATTTATGTGTTTAT
CATTGTATTATTTTTAGCGTCTTCGTTATGTCAAAGAAGTCAGTAAACAC
AGCACCTCACTAATGGTCATTCTTTTTTGGGACCGTTAAAGTCACTAATA
AAAGGCTTTGAGAGACATTAAAAAACCCCATTATATTCTGATAATTATAT
GGAGAAAGGTTTACTTCCTAGATTTTTATATTGGTTTTAAAGGAGGGTTT
GCGGTTTTTTAGTTGCAAAGAAGGTTTTCCACTGATTGATACGAGGATGG
CATTACAAAAAAGTTTTTTCAGGATCTCCATAAATCCATCAAAAATGTTA
AAATGAGTCCCTGGTTTTAAAGATATAAGTTCAAAGGAATAGGAAGTAAC
CTGGCTAATTATTATTCTCAGAAATGCAAAGATAAGGAGATTATTTAAAA
TCATAAAAGAAGTGCTTATCTCACTGTTAAAGTTAATAAATGATATGAAA
TTTCTAAAAAATGTCCATCATCAAAGGATATAAGTAAGATTATAAGCCTA
TTAACAGACTTTTAAATTCATTAGAAAGTATGCTTATGGTAATTATATTG
ATAACAGAAAATCCCACCATGTTTCATTAAGAATCTCGATGTCAAAGAGA
GCTGAAGACAATGCAAAATAGTAGCATGTCCTTTTTACAATTAGATAGGA
ACTTGACAAAAAATGCTGCGAATTCTCCATAATGAAACTCTACTGAAAAA
AACTGAAACCTCTGTCGTGTCATCCAAAAATCTGCAACACTGTCCTCCCA
TCTAGACAAGATGTAGCTTACAAATGAAGTCATTTTGATCAGCTTATAAA
CAATTTTGATTGAATTTTCAATCCTTGTTTGGCTATCACGCCCAGTCTAT
CCAGCGATGTCACAAAATGAGCTGCTTGGATGGAGTGATTCGACGTTCTA
TTTGTCGTTTGTGACGTAAAAGTCGGGAATAGTTTTTGCATAAATTATAA
TAATTTTTAAAAAACTTTCCATGAATTTTCATTATTTCTCCTCTTTGGGG
TTTATTCATTTTATAATTTCTAGTCTGAAAGTAAAAAATGAATAAGAAAT
GT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063216TCONS_00063216Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063216-proteinTCONS_00063216-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_384supercontigscaffold_384:110060..112961 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.7	0.7	0.47	0.37	0.2	0.15	0.28	0.22	0.2	0.25	0.25	0.17	0.54	0.95	0.1	0.15	0.14	0.36	0.05	0.17	0.16	0.22	0.37	0.41	0.86	1.2	2.3	1.81	2.86	3.54