XLOC_038945 (gene) - C. hemisphaerica

Overview
NameXLOC_038945
Unique NameXLOC_038945
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:1127848..1129198-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038945 ID=XLOC_038945|Name=XLOC_038945|organism=Clytia hemisphaerica|type=gene|length=1351bp|location=Sequence derived from alignment at scaffold_361:1127848..1129198- (Clytia hemisphaerica)
ATAAAACCTATATAAAAATCTGATATTTTCTGAGACTATAATTTAATATT
CACATTTGCTATATATAAATACCTCCTTCTCCTATATTATACCCTACAAT
ACCAGTAAAAATTCCCCCGCCATAATTTGTTCTCATCGCAAATTGCAACA
GGTCTTTCTTATAGCAGTTAGCTAAGACCAAAATTTAATGACAGGCGGAA
ACCACAATCTAACAGTCTTGTCAATTTATTTTTTCATACTCGTAAATTTG
TTTGTACTTTGAAATTTTTCGATGCCCTTTTACTATCATCAATAACAAAG
AAGAGAGTTCAACGATTTCAAATATCTTACAAAACGTTTGCATATATAAA
TAAATAATAAAAATATTTGAATATTTCCAATCCCTCAAGCGGTCATTCTC
ATAACTTTCATTTCTACCCATGCTTGAGTTCTGTAAAACAGCAAGGAAGA
CCAATCTACTTTGCTTGCCGCCTTTCCATTCTCACGTGTGTCGTAAAACC
CGTTCAGATTGGATTCTGCGCATGCGTTATACCACCATGCTCCATGCAAG
TCACGTGCACAATTTTTGGTCGCATGGCGGTCATTATCTCGATCAAAGGT
CGAGAATTCCATGTTGTCATGGTAACTCAACGAATCACCATTCCCAAAAC
TATATTTAATGTGAAGTTTGTAGTTTGCCGCCTCGCTATCTATGGCAAAG
TGTTTGTAAAATGCCATATATTTCAAGTCCCAGGAATGTGGTGATTTCAT
AGTGATTTTTAGTTCTGAGCCTTTTGGATATAACGCTTGTGTACTCAGTG
CGTATAGATTCTCGTTGCCTATCCAAAATTCGCCTTGAAGTTTCCCGAAA
CCTTGCTTGTACTGCTCCCATGAACGATAGAAATTGGTGCTTCCGTCCAT
ACGTCGTTGTATCACCGTCCAACCGTTGCCGTCGCAGAATACATTTGTGC
TCCGTAAGCCGTCCATTGTAACAGTGTAGATTCCGGCCACGTAGTTGCCC
TTGAGGTAGAATTCTTTACAATCTCGTTTCGGTGGTAAAGCACGACAATC
ACAATAGTGCCGGTCAGGTATCGTCAAATCTTCCAAACATTGACATTTTC
CGCATTTATTTTGAGCGCAATAACCTAAAGGTTTCTTTTCACGCTCTTTT
AAGTCTGTAATTTCTTTCTGAAGTTTTAACACCATCCTCTTAAGGTCATC
GTTTGAAATAACAACTGCTGCAGTAGAAACCTGGGTAAATTGGAAGAGCA
ACCATGCTCCAAAATTTATTAAAATCCATGTTTGCATCATCCTTCCTACG
TTTCCAATGAATCCGTACTGATCGGATTAAAATGTAATTGATCTTTTCTC
T
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062122TCONS_00062122Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062122-proteinTCONS_00062122-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:1127848..1129198 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
FCN3ficolin-3 isoform 1 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03	0.12	0.32	0.24	0.04	0.26	0.8	0.79	0.42	0.39	0.57	0.1	4.01	3.41	5.12	9.35	2.52	3.16	1.78	4.77	2.25	1.76	11.58	14.57	19.81	15.6	35.78	29.1	0.59	0.63