XLOC_038545 (gene) - C. hemisphaerica

Overview
NameXLOC_038545
Unique NameXLOC_038545
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_358:446398..450053-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038545 ID=XLOC_038545|Name=XLOC_038545|organism=Clytia hemisphaerica|type=gene|length=3656bp|location=Sequence derived from alignment at scaffold_358:446398..450053- (Clytia hemisphaerica)
GGCGAAAAATTAGAGAGACGATCAGCAAGACATTTCCAGAGATTCCCAAA
GAAACATTAACATCCTTGATACCAAACAAAGAAGAAATGAGTGTCATGAA
GATTTTGACGTATAGTGAGCGCAATGTCACTTGTTATTGTCTGAAAAAGA
ATCCTATCTTTTTTGAAGTAGAGGGGTGCATTCTACCGACAGGTTAGTCC
CCTGGTTTGGATTGTGTATTGAAAGGACTTTTTTAACACCTTTAACAGTC
TTTCCTCTGTTTCTTCTTCGTTTTTAGAACAATTTTGTAACAATTTCTTA
GAAATTCCTTAAAAGTGAATAAAATACTTTGAGTTTACACTTAAAGGCAC
AAGGCTTACAGTTTTTCAAACGTGTTCCGTAAGTTGATTTTTCTACTTGA
CAATCGAATGTCTTCAGTACCGTGGTGCCCCCCCCCCCAGCGACCGATTT
TCTTTTTTTTTTGGAGGGGGTAGAGGCGCCAAAATAAAAAGGGCGCAAAA
AACGCCTCTGATTACTAATTTCGGCGCCCGTTTGCTCTTATACACCTTAG
ATAAGGCAGTTTTCGGCCGAAAAGAGAAATATCCCCCAATTTTCGTGCTC
GCATTGCTCGCGTTATTTCTAAAAAGAGATTTACTTTTCATAGGGCGGGG
TTTTGCCAAAATAAAAAAATTTTCTAAAATTGCCTCCCCAGTTTGTCCGA
ACTTTAGTCGACCCACCACAGTACTGAATGTCTTCATTCTAAAAATTACA
TTTAATTATACATTATACAGACCATTGATTTAAAACGCGTTGATGTAAGG
AAGAATTGAGTTAGGAATGTATATGAATGGTCTAAATTTCTAATGGGAAA
AAGAAAAATTTAGCTTATTGCTTTTACAAGTTTCAGTTCACGTGTTTTGG
CTTGCGATCATTTTTACCGAGTTTGTCATAAAAAAAGTTTTCTCTATGTT
TTAGTTTACACTTTATGGCAGCATCCGAACTTAATCTTGTCATTCAGAAC
ATTTCCAAATGTACTCAATAATTTACAAGGAGGTGCAGGTAGGTGGATGA
TATATATTTTCAAACACGAATTCTTTAATGCGCCAAAATAAGTAGGTAGA
ATTTAACGGTATTGAAATTAACACGACAAATTATTAAATATCATTTAACG
TTTCTCCTACCATTTGTTCACGCAGCATTTTTAAACAAAAGAAAGAAATT
TCTCCCCCTCTCAAGCCGCGCGAGCGAGCTGAAATTTTGAGAAAGTCTCT
TGTTAATTCTACTTAAAAGACAGGCGCGCCTGAATAGAATAGCTGGGTGT
AAACTTTTAGCGTGAGTGGTAATTAATGAATTCCGCTTACAATGATTTTC
CGTGGAGGTAATAAAAATATAGATGGAGGTACCACTCCTACTATTCTAGT
GTATTGTATCGTTGATAGCAAACTGTTGCTTTGTTGCTTTGGGGAAAAGC
CATTAATTTTGCTTTCGCTCATGGGAATACTTGAGTCGAAGAGAATTTGA
ATAAAACCACGCTACATTTTTAATTTGTTCATTGTGTGATGACAGTTTTG
TTGATAAAAGATAAGAAAACCATGCAATAATAAGCACAGAACATCGAATT
TGAAATATTCGCTGCTCAGGGAATCCTCGACAAATTTTGTCAATTTTTAC
ATATTTACTAATGCCAATCTTTCAACTATATTCTATCAAAATTTTGAGGC
AGCTGCTATTTTAGATCTAAAGATATTTATAGCAAAGAACCTTCCGCAAA
CAACAAAGAATTCGCAATATTTGAAGAAGTTTACCTCTCGAAAGTTTCCC
GATAAAATAAAAACTTCTTTTAAAACTATAAAGAAATTATTACTCGAAAA
AAATTCGCATTTTACCTAAAAATACGAGGTTTCTTTGGACAGAATAACTT
TACTTTAGTTCTTATAATCTATATCGTGACTGATTTTTGCTATCAAGGTG
ATCAAAGGAGGCCGATTTGAAAGAAATTTCTAAAGAGTTTTATGACTTCT
ACAGAAAAGTTATTACTCCATCTAACTTTTATTACCTCTATGGATTTTCT
AATATTACTGATTTTACTGCTTTTCTTCGCCTTACGGGACTATTTTTCAA
GTTAAAATCACGGGCTTCTGAAAAATCTACCACTGCAAGTGGTTTTTCTC
AGCTAAGGTTGCACATTTCCAATTCGAAATTTGCTTGCATTGCTTTGACG
TTTTTCTCAAAGAAGGCTAAAACAAAAAGCCGACAAAACGATTCCACGAA
CACTGATTTGAGTCTATGGTAGTTAAAAGGATTTTTTGTCCGTCTGAATG
AGCCGTCTACCATACTAGACTAGTAAACCAGGTAACATTTCTCTTTTTTT
TCTCGACAGATTTGATGTTTCCTGGTATTATTCCACCTGCAACTGGATTT
GGTGATTTCCACAAAGATCAAATTGCCGCCGTAACACTGCTTGGGAACGG
GTAAATTAAACTTGATTCAATTCTTTATTTACTATCTTTGTACCAAAACA
TTTCTTAGCAGTTTACAGTAGCTTTATTCAGGAAATGCACCACTGCATCA
TTTTTGCCTTTTCATCCTTTTATGTCCCTTATTACTTCTGAAAAGATGGG
GAATGCGTGGAACTTGCCTTCCCCGCAATGACTGGCTCCCTAGCTTCCTA
GCTAAATTCTTACTGTCCGTCTATTCAAATAATATTAAAATAGGCTAGAA
GAATAGTCAAATTTGACCGACATTTTTATTCTTATTCTGTGGATGATTTG
CATGTGTTTTTTTTCGTTTGTTCGGCTTCTCAATATTAGAATCTGCCCAA
ACTGTTTGACCTAACTCGGAGGTCCTTTAAATTAACCCGGATGTCCGTTC
CATCGTTCTTCTGTTCGTCCGTCTGTTACCAGCTTTTCTCGGGATTGGCT
CATTAGTTCTTTCTGATTTTTTTGCACAATGATGTAAAGCGACAAAGCTC
AAAATGTGATTTTTAAAGAAATCTTTTTTGGGCAAATTTGGTCCAAAAAC
CACCCAAAAATAGGGTTTTTCGAACAAAATTTGTTACGTAGAATTTCCTG
ATTTTTTCCAGAAAGATACATAATAATGTGTGCTAAAAAATGGCCGAAAC
AACTTTTTCCGGAAAATTCTTATTCGCCGTAAAAAATTTTACGTGATTTT
TTTTATGTCAAAATCTTGAGCTTCTAAAAAATCTAAAAGTTTTTCTTCGA
TAAGATTGCACATTTCTAATTCGAAATTGCTTGCGGACAACAGTATTGTT
TTTCCTATCACCTTTTAACCATTCAGCGAAGAGTGATGTGCTTTTTATTT
AATTTTTCCTTCTCATTATTGTATTTTGCTTCTGTGCTGGACATTATTAT
CTTTCTTTTCTGGTTTTATTTTTATGTGACTCTCATCATCAAGTAGGTCC
ATTTTAGCATGTGGTTTGTACATATCATAGAAAATCATGTAACAGACTAT
ACAAATCTCCATCTCACCTAATTCGAACAAATCCCTCTTAAGATTTCAAG
TTAAAGAAACTCGACTTTGAATTCCATAACTGTCCATCTTTTTTCAGAGC
AGCAGTAGCAGTGGGAATCACAACCTGCAGTAAACGTGATATTGAAACCG
GTGGTCCACAAGGAAAGAAATTGACCATATACCATTGTGTCAAAGATCAT
CTGTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061445TCONS_00061445Clytia hemisphaericatranscript
TCONS_00061444TCONS_00061444Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061444-proteinTCONS_00061444-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_358supercontigscaffold_358:446398..450053 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.93	19.05	7.82	5.59	13.27	10.48	11.31	11.68	9.41	6.96	7.27	7.08	5.67	5.7	11.32	8.34	13.39	10.63	4.24	3.25	3.6	3.83	13.56	16.15	9.71	9.84	4.19	4.08	7.82	9.92