XLOC_038275 (gene) - C. hemisphaerica

Overview
NameXLOC_038275
Unique NameXLOC_038275
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_350:180438..185042-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038275 ID=XLOC_038275|Name=XLOC_038275|organism=Clytia hemisphaerica|type=gene|length=4605bp|location=Sequence derived from alignment at scaffold_350:180438..185042- (Clytia hemisphaerica)
GAGAACTTCAGTTTGGACGTTGCAGAGGAAGGATGCAGGACCAGAGATTG AGAATCCCTTTTCACAGGATGAAAGTAGAAGGAGAAGGTATTGAAAAATT TATTTTTTGTTCCACTCAACCTGAAAATAATCTTATTTTACTGTCCATTA TTATACCACTCGATATTCCGGAACATCTTATTCATGCATGGCACTCCAAA AATGTCATCCTCTCACATATTGCTAAATATGCTTCGTAGGACTTTAGACA TGCTATTCTAATATTGCTACCTGCTCAGATTTGTGAATGTTTTGTTAAAC TGTAGAATATATCTTTTTACCATACTAGATTTCAGAACAATTTTATCGTT TTAGATACGATTGCAATACGACGAGCGCGGAATGTGTTATTGGTCACTGC TAGCTTGTGTTTGGTCACTTTCATCACATTAGGTGTCTGTTTCTTGGATG TACCTAAAATTGTAAGGTAAGTGGATATTTACAGTTTCCAGTCTTATTTC AACGTTGTTCGTCAGTTGGATTACGTCATTGGTTGTAGAATACATTCATT TTGTTTTATAAGCATACCTAGGCTCTGTTTCGGTAGAAAATATGCATAAT GCTAAGCATACCTTCAAGCTGAAATGCTAAAATAATCGTGCAGCTTAGAT CATATTTTTAAAAACATACACATTTGGAGGCTGTCAGCAATGTTTTTGAC TAATGACTAGCATATAAATAAGTATAAATTAAGGCTGAAAATGAGATTTT GTTAAGCACATTTGAGCCTCGACCCGATTTTCCCGTATGCTTATAAAACC AAATGAGTGAATTCTCCCAGTTTATTTCTCCATAAACATATAAACGACTG GACATCCATCTCCTTTGTCTTTTTGTAGAAAAGGCTGCTAGCTTCGTTGC CGCCTCGTTAAAAGCATAAAATGAAACAANNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNTTTTGTTGTCGCTATAAAAAATCTGCATAATTAGCGTGTTG TGACAAAATTCTTTTGTTTCAAGCCTGATTATGCGCAAACTTTTAGGGCT TATATTTTGGATACAAAGATAACAGAGGCAAAATCATCGTCAGCTTGTCA AAACTCCGACTAATATTTCTAAATTTTGACTTAAAAGTGTCTAATTATTT TAGAGAGTGTCACATTCTAATTTCGATTTTCTTGCGAAACAGGCTCTCAA CTTTGGCAAGCTATTTTTTTCAAGTCATAAAAAAAATTATTTGAGTGACA AAAGGGATTCAAAAGTATACACGCAGTTGAAATTCTGCATTTNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNAAAATATATTGCAAACTTGTGAAAAAATTCGAAAATAATTTTT TTGTACATTAGGAGTAATGTTCAAGCTCTATCAATCCTTTTACCTAAATA ATTCAAAGAAATAAAATTATGACGGAATATTGTCGGATTTTTCGTACCAA TTTTGAAATACAAGCGGCAACGAAGCTCGCTTCAAAGAGACAATAAAAGA TAGACGTCCAGTCGTTTATATGTTCATGATTTCTCAATTATGACAATTGC ATTTTTTTTTTGAGACAGACTTTAAGTTGAATTGTAACCAAATAACCAGT TCTCGAACAATTACGTTTTTTTTATTTTCAGCGAAGATGAGACTACGTTG AACACGCAGTCGCCTGTCTCAGGTAAGACGAAAAATATTTTCGATTGCAA AGGAGGTCAAGTGGTATCTCGTCCTACCACCTTTTAACTTTTCATGCGTT TTACTGTCTCAATCTTCAACATCACCAAACTTACCGAATTTTCTTTGGTC ATAACATAAACACACGCAAAAATGAATCAAGGTGGTATTTGCTAGGCTGC TAACATTCTTCTTTAATATGTTTTCGTAGAGCGAAAACTTTTTCAAGGAT ACTGCACTGCGTAGTCAAAGGAACCAATGAACTAGCAATCACTTTCTTAT TTTGTAGATAACAGGTGGCCAAGACGAAACGTCAAACATTTGTCTTTCTT ATGGAATGATCACGTCTACACTCAGCGTGTGAAAGACATCAAAAAGGTTT TGGAGAAGAAGTTGGAAACAGAGAGTGAACCGATTTACTTGTTGTCGGTG ACCAAGGATAGTTCAGTTGTGATGATGGCTATGAAAGCTGGTTGGAAACG AGCATGCCATCGCCATCCTGTACATCTAAAGCTAGAGGTTTTGGAAGGTG AAATGTATTTCAAATCTCACGAAATGAAGAATACGATTCACATGAAGCCT GGTGACGAAATGGTCATTCCAAAATGGCAGCCTCATTACGAAGGTGTACA AGGACGTAGAACAGTTTTTGTAATTATCACACTCTCACCAAATTGTCCAC CTGACAAAATTGTTGAAATGTTAAATGCTGACGAATGTGATTCTGAAAAG AATCCTCCGTTGACGTTCCCTCCTATTCATGAGATGGACCAGCCTGTTGA CAACCAGCTCCCCGACACGTGGTCAGCCACCATTGTCCTGCATCCGTTTA GTGAAGAACAAGGGACTGGACCCGAACGAGATTTTCCTTTCTTTCAACTC AGTCATGGTCAGATGACCTATGATTATCAAAAAGGTGAAATGTTGATTTA TGTAAAGGGATGTCTTTACGGTGAATGGTGGTTTAATGTGACCACGCATG CTACGTTCGTGGCCAGAAATTCGTCAATGCAGTGGAAAAAGATCGATTTG GGATGGACATTACCGGGCAAGAATTGGATTGATCCAGAAGACAAATACAT CGGACATTCTCAACTGAATTGGATGAATGATGAAGTTGACGTTGATTGGT GGAAAAAAAATTACAAAAATACCTCCACCTGGACATGGTTCGATCGGAAT AATGACGGTTTCCCGTTTCGGATTATGTTTTCCGCTCCACCCAGAAGCAA CTTGAAAGGCGAACCCGATAATTTGGCGTTCTTTCAAATGTACTCATTCT CGTTCATCGTCAACGCAAAACCAGAGCCAATCCACCACTCACGACTTCAT ATCATGGATATCGGAAAAATCGGATTAACATGTGGTAATCCCGATAATTT CCAAGTTTTCAACTGGACCAATCACTTTTCAGTATCTGCTCACATGATTC CAGTAGATTACCCGCACAACCCGTACCCAACCAAAGTGTACTATCGCTGG AATGACGACGAAGAATACACAGGCGCACCTTTTGACCGCTCCCAGTCTAC CATCTTTTATCACGATTACAACCGTTTCGAACGAATGGAAGGAATAAGAG CAGATTTATTTGGCCATTGGAATAGCACTACCAAACCTCGTCCAGGGGTA GGCTTTCTTTTGAAGACAGCAATCGATAGTCGGCAGACAGAATGTTCACA AATGTTTGCTGGTGAAATGCCGATCGCCCAACAACCGCCATGGTGGCCAC AACTCGGTCAAGCAAACATCCAAGCGATCATCAGAAGACCGGAAAATGCT TCAGACGAATGGAGATCACCCCTCACCGGAAGCGATCGAACCGTCGCTAT TATCCGCGTCACTTTTCCCTCTCATTTACCGAATTTTCCGAACTCAACTA GCCTCTGGACCTGGTACGATTATACCGATTTCATTCAGGCTAAAGCTGCA GCCCGTCCTATCGTGTTCATGCAATCTGCTCCTAAATTTGAATTGGGAAC TAGTCTTGCGTTGGCGGATTTTTTTGATTTTCATGTTTTACCAGACACTG TTCATTCTCGGACACCCCTTGATTTAGAAAACTTGAACACATTTTGTAAT ATCACTCTTTGAAGTTAACTTTTAAAGTTTTGTATATACACTTGCTCTCG ATTAGTAAATGTAATCATATGATAACGAGTGCAATTCGATCAGCTGATCA CACAATTGGTTTCACTACACACCCCTGTCTCACAGACCCACTGGGACCCC AGCCTCACTGGAAAATTTGGCAAAAATTTCGTCTCCGGTGAGAAATTGAC TTTGATTTCGTCCCCTTTCGAAATTCCATGTGTAAAGTTGCACTTCAAAA CCATCCCCGCTGGATATTTTAACCTTGGAACAATAGAATTTTTATCTTCA TTGGGATTTCAATAGGAATTTTTTAACATTGGAACAATAGAATTTTTATC CTCATTGGGATTTCAATAGGAATTTTTATCGCCGCTGAGGAAAAAAGTTC CACCGGGGCTGTGAGACTGGTGTCACTACTTTTTTCCCATTAGGGAATTA AATTACACTGAAAATTTTATATTTTTCTCTATGTTTTCTTTTATTGTTAT TTATGGATTTTCTTTCTCACAAAATCAATTTCGAATGCGTTCGATGAAAA AATGCAAGAATAAACAATAAAATCAATTTGGTAAACATTTGCGCGGTATT GAAGAGTGAGTAATGATTAATTGCTTTCTACAGGATGCAATTAACGATTA ATTGCATTATTAATTAAGGTACGACAAATAGACCTTTTCATAAATTACGA ACATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060975TCONS_00060975Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060975-proteinTCONS_00060975-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_350supercontigscaffold_350:180438..185042 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.75 0.71 0.52 0.42 0.11 0.12 0.06 0.18 0.2 0.14 0.11 0.32 0.3 0.28 0.18 0.22 4.03 5 0.44 0.22 13.03 12.86 11.82 17.64 54.82 45.78 45.45 109.36 0.51 0.41