XLOC_038072 (gene) - C. hemisphaerica

Overview


Name	XLOC_038072
Unique Name	XLOC_038072
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_344:75987..87718+

gene from alignment at scaffold_344:75987..87718+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_038072 ID=XLOC_038072|Name=XLOC_038072|organism=Clytia hemisphaerica|type=gene|length=11732bp|location=Sequence derived from alignment at scaffold_344:75987..87718+ (Clytia hemisphaerica)
ATTTCGACTTGTTTTTGACTATCTTTAAAGTTGACatcttttttgctttt
cttctgtttttttttcagtagtTGTTATTCCCAAGGGGATTGAATGATTG
AAAACAGGTCTGATCTTCGACAGCTGCTACGGGAATTGTAATTctgtcaa
ttttctttgttttagaaaatcaacAACGTGGAGTCGTTTAACCTCGATAA
TTCCCTTGGGAATATATATATGACCCTCTAAAGAATTAATTAGAAGAAAA
ATGCTGCATCTGAACgatataaaagaaacatcaaGTCATTCCCTAATCAT
CTCCTCCTTGTCATAAGCAAGAGAAGAAACCTGCAAAACaccttgaaaag
tttttttcataacttCTCGAATCTCTCTGAAGAAATGGCTCAATCACTCC
CATCAAAGTAAGTATGAGATGTTTGACTTCAAAATAAGGTTTTACGAAAA
ATGACTTTTGATTTCGATTTTGTACTATCAATTTTTGTGAAGGATGCTTG
AATCAAGGTTTTCTCTCTATTATTAGGTGCTTACTTGGCGGAATGTTCTT
AATTAATATTGGAATCTTTTCAGTCATAGTTAAACAAGAATTTGTTAAAA
GTAAATTTGCTTTTGAACTCTCAAACCATGTTTTTAGGTGTTTACACTTT
ATGGCACTTTATATCTtcagtaaaaataattcttgataTCTTTTCAGCCC
TGCAGGAGATAAATACGACCACCAATGGGAAGCTTTAGCTGGATGGTTTC
TGGGACCACGTGCTGAAAACCGAAATATCTTCAATGATTTGATGTTGAAA
GCTTTGAATTGGCATGAAGATCGACGTGAGGAGTTCTTTCCAGCCGATCC
TTCTTATTTCACGGAGGAGATCAAAAATTCTGAAGCTGCTCAACATGAGT
ATAAAGATATggaaaaacaaatgaaagaGATGCATCGAGAATTGAACAAA
TCCATTCCTTTCTTCAGCACCAGATATCAGGTAAGTCTCTCTAATTGGAA
ACCGTGATGTTTTATCGTAATTAAGTCTTAATTAACTACATACTTTTAGA
AGGACTTTATTCTATGTTTTTACCATATTTAAAAGGAGAAAATGTCAACT
TTCGCGATGCGAATTATTTCTGTTTTAGCATGTGTCTatgaaaacgaggc
tgaaagCTTGAAAANTTAGTAAATTCCGAACTTTCTTAACTTTTACAGTC
CTGCTGGAGACAAATACGACCACCAATGGGAAGCTTTAGCTGGATGGTTT
CTTGGACCACGTGCTGAAAACCGAAACATCTTCAATGATTTGATGTTGAA
AGCTTTGAATTGGCATGAAGATCGACGTGAGGAGTTCTTTCCAGCCGATC
CTTCTTATTTCACGGAGGAGATCAAAAATTCTGAAGCTGCTCAACATGAG
TATAAAGATATggaaaaacaaatgaaagaGATGCATCGAGAATTGAACAA
ATCCATTCCTTTCTTCAGCACCAGATATCAGGTAAGTCTCTCTAATTGAA
AACCGTGATGTTTTATCGTAATTAAGTCTTAATTAACTACATACTTTTAG
AAGGACTTTATTCTATGTTTTTACCATATTTAAAAGGAGAAAATGTCAAC
TTTCGCGATGCGAATTATTTCTGTTTTAGCATGTGTCTatgaaaacgagg
ctgaaagtttgaaaatatatcTCGTAAGCTTCTTTCGCGAAATGGTTCTG
AAAAGTTAATTCACAGAAATTTTTTCCCTAATGAAAGGAAAGAGTTTGCT
AAATTCTGGAATATATAGCATTGGATGCTTTCCAAATTGAATATGCCGTA
TGATCCATCAAAATACATAAAGGCGTTAGGTTTCCCTATGTCAAACTCCA
CAATAAGTCCAATTTTATGTCGTTTATTTTAGGGTCACATGACATGGGAC
ATCACAATGCCTTCCTTCTTGGGATACGTTTCTGGATTGCTTTGGAATCA
AAACAACGTTGATTCAACTGCTTCACCAGTTACCACCAAGTTTGAAGTGG
AAGTTGGTCAACAACTTTGCAAATTGATGCGATTCGATGACACCAAAGTC
ACACCATGGGGTCATTTGACAGGATGTGGATCAGTCGCCAATATAGAATC
GATGTGGGCTGCAAGAAACACCAAATTACATCCATTGGCTTTGAAAAATG
CTTGCGCTGACCCTCATTTTCCTGAACTGATCGGTAATGAAATCTTTCCT
CGTATTTAACAGATTCAGTAGTAAATAAAGAAGGATTTATAACAGCTTAC
AGCTCTCACTTGCCGGTTGAATAGAAATCGCTAGCTATGCATGAAATTAG
AAATGATACTTCGTAAGTCGAGCTTAGCGTTACGAAAATTGCTTTGTCGG
TTCAGTGATTTTAAACTCTTCGTCACTTTACAATTCTAATATTTAAAAGG
GATAAGCTTTGAAGTACAAATCTTTCCACCAAATATGTCATTGTTATGGT
AATAAAAACGAATCTTATTTGTTACATTTCAGACGGTTTGGAATGCAAGG
TGTTCGTGCCTGcccaacaaaaagaaaagactttgaaagaatGCACTGAA
TGGGAATTATTGAACTTGAGAATCGATGACATTTGTTCTTtgactgatga
cgtcattaaatgCATCGAACAGAGAAATCCTGATTTCAAAGTTGACGTCA
AAGCAACTGTTGATAAATCTTTGGAGGTAATCCCTTTCTGTCGATTTTGG
ACCTTGAAATCTTGCATTTTGCAGGCCCTGAAGTCTGGTGTCAAAAGGTG
TTCAGTGTTTTTATTTGCCTATAATCAGTTACCAAATAATAAGTCTGGta
ctgttggaaagatatttaaatgtacttatttttcacaaagtttttcGATA
GTAGTCCAAGAAAATTACCCTGTTTATATGGTAAAAAGATGCCCCGCAAA
TTGATTTTTCTGTCAATCAAAAACTGAATGATACACGAGTCCTTTTTGGC
ACATATTCCACTTTTGGTATTGGCGCCTTTCGTTCccaacaaattttctt
ttccttaGAAAAACTCTCCAGTGCAACTCGGTTTACCTGAATTTTACCGA
CGACACAAGATAGGTGAACCAAGCGACAAAGACGCAACAGTACGAACATA
TCCACTAGTTTTTTCACCAGGAACAAACCATTATTCATGGCCGAAAGCTT
CCACCATTCTTGGCATCGGTGATTCTAATAACATCCACATTCAAGTTAAC
AGCAAAGCTCGTCAAGATATTGAGAGTAAGTGATTATTTGAAACAATGGT
ATAGCTTCCcctttttttcgaaagatgtTCTTCGTTGCTATACGAAGCAA
AATCTGGGTTATTTCGTTTGGAATATTTGCGATTAGTTTGAGACTAGAAC
TTTGCTTTGGTCCTTACAAAGAACGCCCTATAAGAGTGTCTCGTGCTGTT
TCAACTCTATTCAACTTGTCTTTCGTACCCACCAGCTTTGGAGAAGGAAT
TGGATTATGCATTAGAACACAAGATTGCAGTGTTCATGGTAGTAGCAGTG
ATTGGCTCAACAGAAGAAAGTGCTGTTGATGATATCGCAAGAATCTTAGC
TCTCAAACCTAAATATGAAGCCAAGGTAAATCTTAGACTTAGATATCCAA
GATTCGCTACAAACTACCGTAGGATTAccaaactttctcattcccggtaA
AATATTCCTGTCACTGACCGCTTAACAaataaaatatacttttaaCTTAC
CCAAAGTCTCGGTCTTATTTCCGTTGTAAAGTCAGAACAGGAAAGCCTAT
ATTTTAAAGCCTACATATTTTAAAAAACTTGCCTTTTGGAGGCAGGGAAA
ACGGGTGCCCGGGTGCCTTTTCGTCAATTTCGTTATCTTCAAtgactttc
ttttaattttatgAAGGGTTTAACATTTTCGGTGCATGCAGATGCAGCAT
GGGGTGGATATTTGAATTGTATGACTCACGAAACTGGTCACAAAGAAAGC
AATGTTTATTCCAATTGTCTTCCAACAAAAGCTCATGATTTCGTTCCTGC
TATTCCACTTTCCGATTTCGTCAAGAAACAATATGTCAGTTTGCAGTTTG
CTGATACAGGTAAGATATGCTGACAGACCTAACAGGAGTAGATACTACAT
ACTATAAAGTGTGTTGGTCTAAATCgaagacctctatagatatacttcct
aattatatattatattcttCTGTTTCTATAAGAAACATTATAGTGAGAGG
ATGAACAGAAGCCTAATAGTGTCCGTAAAAATGAAACAGATTTACTATGA
GTAAAAGTGAGGTAACAATTTAATCATACcatcaattttaaaaataactg
tggaacttttttatttcagccAAACAAAAAGTGCACTCTTTAGTATTTCT
TCCGATCGTACTGGTACTTCACGCTTATTTAAATCTTATCGCTCTTTAGT
GACCATCGATCCTCACAAGTCTGGATTCTGTCCTTATCCTGCCGGTGCAC
TTCTCTACCGAAACGGAACAATGAAAGGTTTCATCACACTTGCTGCACCA
GAAGTTTTCCACAGTCCTGATGATTTGAATGTTGGTATTTATGGTTTGGA
AGGATCGAAACCTGGAGCTGCAGCTTGTGGTGTTCTTCTGTCTCACCAGG
TAAgataaaatcaaagatttattatacactggataaacgactcataaaac
gatggagagcgatcattgtattttcattgtttcagaaaacaattgatgtt
caagctttgtccgcaaaggacaactgtcatggcggctcgaagatgtgtga
tttaaaaaaaatgtttatcagtcttatttaaaaaaagttctctagctctt
tctttttctccatttgcagaaaaaagtttgaaagtaaggctagcatacca
agctggatacatttgtgaagtctggtgtgagaaaatcatcattagacaag
aaattcagacaaaatgcttatagtgacacgaaattttaaattgcaaatat
ctttccaagactgtccccagaagagctgaaattagcaTACATAAGactga
gtgtcttggctccactgtggtatgaaaatcctttggaggcacgtggtggc
aaggtggtttttttgaggttgaagtttgaaaatttccggtgtcaacattc
aatttcttatacacaacacgtctttggCATCTTTATcgcagcttgaaacg
tcataacgacttgtAATTATCAATTAAGTAGAAGAATCTGattctcacag
gaaagttttaagtctcttttgggaattggatgagtggttttcgataagaa
atgcaatagaaatgcttcgaaaaaatatttaatgagggaaggagagtgaa
caataatatcattactgcggacatagctaatacacgagaaatcagcaaaa
atcggttacttgtatatccagtgtataataaatccttgatcAAATACTCG
GAAAGTCTAGAAAGTGATTTCAGATGACTTGGTTTCTGTACAGTGATTGT
GAGTTACTGAACCATGGCAGATATTTTATCAGAGCTATCCTACCAGCGTT
CACATCTTTAAGATTTGAAACATAGggtgttttttttatcattttggtac
gcaaactttttgaatttaaaactgGTACTTCATCTTCTTAAAGTAGACTT
CTTCAGAAAACTTATTCAGATCCTTAAACGGATTTTTAATATATTTGACT
TTCCCTTAAAAGGTCATTGGTTTGGATCAGAACGGTTACGGACGAATTCT
TGGTCAATGTCAACTAGGTGCCAAACTGTTCTACTGCATGTGGGAAACAG
TCGCCAGAGATGACGATCCTTTTATTTGCTGCAACTTCATTCCACTGGAT
TTGAAAGAGTTAAAAGAAAAAGGATTCTCATTCGAAACACAACAAGATGT
CCATGACTACATTAAGAAACATATCATCGGTAAACCTAATGAACAACTTG
TCAAGAATGTCCACAAAGAAATTGATTTCTTGGGAGTCGTTGGTCCTGAC
GCTTTGATTAATTCGTTCACCGTCAATTGTAAGGATCAAAGCACTGGCAA
CGGCCAACAAAATATCGAGCTGGTCAACGATTTACAAAACCTCGTCTTCA
ACGAATTGACCTGTGAGTATAGTTAATTATAGTTAAtcttaaaatttagt
tttcttcGACCTGAATTATCTGAACCCGTCaccaaaaaataatattgaGC
CTGAATTTGTCTCAGtataattctcaacttcagttgagctataatctgag
aatgtctgtatgtatgcctgtatgtatgtatgtccatccgaaaactttat
ttattttattttatttatttgttctttatttaacgttggtaATAAAAAAT
AGTTACAAGTACTAATTAAATCCAACATGACATTCGAATATTTACTATAT
AGTAAATAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNCCcaggtattcacccaaggaacaagtgtacca
aatttcagccaaaacggacaaagtatatttgctacctaatactaaatatt
tgaaatgttacaattggcccttctaataacgggaaaatctgaagttgagc
ccagtgcggtgcgcacgttcgactattagaCATTAGTACCAAATAACTGA
AGGAAAAACATTAGCATCAAGttatttgcttattttttagcGAGTGTTGG
CGAAGACACCAAACGCGTCAAGATGTTTTTGACCACCTCAAAACTGGAAT
ACTCAAATTATGGCAAATCTGTCCAACAATTGAAGGAGAGATTGAATTTA
CCGACAGAAAATACCCATGATGCACTTGGATTCTTGCGAAACACTTGTAT
GGAACCGTATCAAGCAAGTGAAGCTTATGTGGAAGTTCTTGGTGATTTGT
TCAGAAAGACTGTCCTCACTTGCATTGGTGCTGTAAGTATTTGTCTGTTT
ACATCCCAATATTGTACAGATACCACATCTGCATCTATCTATAGGATATT
TATCAATGAAATAACAAAGAAAAGCAGGATTAGAAAGATGTGACCTAGGA
TGTCACCATAGAAAGACTTTCAAGGTTTGGATTTTCGCTGATCGTCTAGA
TTTCGGTATCAGTATTTAATTTTCTCGTGTCGTATGCTATTTATCGATTG
TTTCTTTACCAGTTGGACACTTCATACGGAGAAGAATATGGCGATGCTTT
GGATTATCACACTTTCACTGTTGTCAACAATCTTCGAAAAGATGGAAAAA
TCTTCTTGGATTTCGTTCCCACTTTCACCAAGAAACAATCGCAATATCAA
GCTATCTTCAGAGTGAAAATCCTCCCACAAGATCAAGAAACTTTCAGGTG
GGGTCTTCAATGGTTACATTCGTGAAATGGATCAGAAATTTTCTCTGTCT
GAACTACATTCCTTTCTTTTACCTTGTCGgcgacttgaaattttcaaaat
cagttGATCTTAACGATCCCATCCTTTCTTTTACAGGGAGATTCAATCGA
AAGCGAGCGAACCACTTTTCATGCGAACAACTGAGAAAGTCAACCTTTTC
CATTTCGTCAAGAACAATTTAGATGCTACAAGAACCATGGCTCTCTATCA
GGGTAAGCAGTTAACTAATGGAATGCATGATAAAAACTAAATTGCTGCTT
TATTTACTACTTTGGTAATTTTTGGTTGCAAAGCGTTGAACAAAACTGTA
TCAGTGTGGCAAGCCTAATAATCAATTCGTATAAAGCTGCGATAAACTAT
GCATGCCATTTCAATTGAAATTTCAACACTTATCCAACTTCTCGCAATTT
TTTTCAGGAGCCAAGACCTCAAACACGTGTTTAGCAAGCATTGGACTTCA
CATTGACGAAGTTTGGAGAATGGAACGTTTTGAATCACCACAATATGCAG
AATACAACgaacttcaaaaatatttcttatacgGAGATGAAGAAGAAGCC
TTCATGTCACATGTCGTCACCAAACAACCTGATTTTTACCAGGTAAGGAA
TCtgatactttaatcgtagaaattttagcgagactaattttagcgtttta
gcgagttttccctattttcgctaaaataaatctcgctaaaacacgccaaa
TCGCCAGACCGCTAAAAtctatccacgcgaaatttctggttatattggcT
TAATACATTTTtgtcaataggaagggtttcagtgcaaaaaaaatgctaga
aaacgaattcaatcAATAATGTAAATGAAGTATTCGCAAAAATTtttcca
cgcgaaattttttgaaatcgtgattcgctaaaattcaaaagaaatcaaga
tttttcctgactcgctaatatacgctaaaattagtcccGTTAAAATTTAT
ACGATTAAAGTAGTTGATAATAAGAGAATCATGCGAGTTAATCTTCCTTT
TTGTGGTCAGTAAGTAGTCTTCAGTCACTTTGACTCAACTGAAGTTATAC
AAAGAACTTTATCTTCAGATTTTATCATCTTCTAAACAATTTCTTAATTA
AAAGTGGAAATTGGGTCAAACAACCTTGcttagtaaataaaaaaaatact
tattttcAGGTCGTGCGTCTTGGCGAATTGCCACATTCAGTGGAGCCTCA
ATTATTGAATCTTGGTTTGACGGTCGTATTACCAGCCATTCCTGGAACAC
CATTGACAGTCGATGGTAAAATCATTGACCCTCTTCAAACAACTCAATAT
GGTGGCAAATATAGAGGCCGACAATTCGCAGAATGTACTACTTCACTTTT
GGTTGGTGGTGAGAATTGCAAAGTGTATTTCGATTCTGAATATTTGAACA
CAACAGTCACTGGTACAGATTGTGCATTGGTGTGAATGTACTGAATTgta
atttatttaatttcagTTTTATTTTCTGTTACGTTACGAATTTTAATATT
tagtaaaaattattttgtacaATGAAATTAACAAATCCAAATAGAATTTT
AACCgcatgaaaacattctaaaTCTCGAAAAA

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00060528	TCONS_00060528	Clytia hemisphaerica	transcript
TCONS_00060529	TCONS_00060529	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00060529-protein	TCONS_00060529-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_344	supercontig	scaffold_344:75987..87718 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1074.78	1135.3	816.27	743	5.53	3.67	1.87	2.07	1.72	2.96	2.39	1.75	1.83	1.82	2.84	2.6	1.76	1.73	13.34	14.16	3.19	2.18	627.6	534.52	1.68	1.49	36.88	37.12	435.14	523.03

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XLOC_038072 (gene) - C. hemisphaerica