XLOC_038004 (gene) - C. hemisphaerica

Overview
NameXLOC_038004
Unique NameXLOC_038004
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_341:461698..467997-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038004 ID=XLOC_038004|Name=XLOC_038004|organism=Clytia hemisphaerica|type=gene|length=6300bp|location=Sequence derived from alignment at scaffold_341:461698..467997- (Clytia hemisphaerica)
CATACAGGACCTTACAAAGGAGAAATGATGATGTCTGTACAATGGTATTA TAAACCGACACAAACGATTTCAAAGGGGAACGATATCATCTGTGGAGACG AGGTTAGATCAGTTTATACTACACGTCTTTTTATAAGAACATCCAAAATT TTTGAAGCCTTGGGATGTTCTTAACTTTTTGAGTTTCAAGCCTAAAGATG TACTTAATGTTCTTATTTTTGCCATTTTTTTTGAGTATTTTTGTCAATTT TCCTATTAAATTTAGTGTTCTAGCATCCGCAAAGGCTTAGAATTTTCTAA CTTTTTCTTAAGACTTTGGCATTTAAGCCCAACGTTTTTATATAGTTTGT TCTTATAAAAAAAACGTGTATTTATTCTTATTCTCCTTGACCAAACTTTT ATATTTTAGGATTGATCTTTCCGAAAGGTTTTCAAATTTAAGCCACATTC TAGTGTTATTAATTATCCAACAAGATTTCAAACATTTTCCAGTTATACAG ACACTGTTACTTACATAGGTTGCTCAAACCTTATGTTATGGAGAGCAATC ACTTACCTCACATAAAAGGGATGAAAGCAAAAGAAGCACTCTCTGCTTTT AGTCTGAAAGTTATGTGTTATGGTCACGCTGTATATCATATTCATGATAT TCATGATGTAAAGTTTTCTACGGAAAGACCCCGGCTTTTGCCAGTAGTGG CAAATTAAAACTAGACAAAAATTGTATAGAATTTGCCACTACTGGTAAAA ACCGGGGTCTTTCCGTAGAAAACATTACGTTATGAATATCATGAATTCTA CATCGTTTTTACACGTAGTCTTAATTTTATGTTTACCAATACCACCCGCT CATTGTTACAATAATCCGTCTCAAATATTTTTCAAAAACTTTAATTGTTT TTAAGTTTGATTTGAACAATTGTCCAATATGCAGCTACAAGTAAGTCAAA TAAAAGAAATTGCAAATGATACAAATTTTTTTAATAAAACGATTTTTCAA AAAAAACATTGGGGCAGAAATAATATGTACAAAACAAACCTGAATTTGGA ACGATTCAAATCTCATTCTCAGCAAATTCATCCTCGTAGTAGTCAAAATA GGGTACTATAGGAAGCTTCAATCACCACAATTTTGCATTTTAAAATTACG AACGACATGAGAAGAATATGAGACTATGATGTCAAAAATAAGAACAACAA AGCCTAAAACAAAATACTGGTTCTTTCAAAAACAAAAAGTGTAATCAAAA TGATCACGAAATGATATAACTTAACTGATTCTTCCTATGTCACTTTTAAC CAATTGGCTCTTTTAAAAGTGATATGATTGCCTCTACGAATTCAGACGTT TGCCGTCCCATGTTTTGTCAGATAGTCCCAAGTTAGAGCAGTTGACGGTA AGTTAAGTGGTTTTAATAAACCTGTAAAACCGTTGTAGAAAAGAATCCAC ACCATTTATCGGATGAAAAAAAGCCATTTTCCAGAAGGTTCGTAACCTTG GTGTCGTTCCCAATCATCACATTCAAACCTGGAGTCTGTTTGGTGAAGAA TAACATGTCCTTTTGCAAACTCGAATATCACGTGATTGTAATATAGGTGA CCGTATCCAATATGTCCTATCCGAAGGTTCGCACAATTAGCCACTGACAT CTTCGAGCTGTCATCCGGTAAGAACCGCACGTTATTGCACATTCCCGTTA TAAAAGAGTTTTGCTCTTTGTTGATAAATCTAAAGATTTTGTCTCCGTAT AAGATTGTGTGGAGAGTGCGTCCATGCCATGGTTTGTAACATTTGATTCG TAGTTCAGTGTATCCGTGGTTGACGAACAAATTTCGGAGAAGATCATGGT GGAGCAGGACATGGCCACTTTGGATGTTTTGGAGCTNATCCGTGGTTGAC GAACAAATTTCGGAGAAGATCATGGTGGAGTAGGACATGGCCACTTTGGA TGTTTTGGAGCTGAGATACTGTAGAAGGATTTTGGAGGATTGGATAGATA TCTGAGGGGTCCTCAAATGTCATGTTTGCAACGGCCAACCAGCCGCCTGA AAGTGAAGAAATGGCAGATCTATTTAATGTCGATTATTCTTTTTGATCTG CTCTGTCAAATTTTCACTAAAATTAATTTTGCATCAGTTCTAAAGCCAGT GAGAAATTGCCTAAATGTAAATGTAGTTGTCTTGTTGATGATAGCATTAC GGACAACCTCACACTTCCCCACTTTTGTCTGAATAGATATTCATTTTTTT TTTACAAATTTTGGTACCATGGCTAAATGATGGATGATGTACTTACCGCC ATCTGTGGTTAAATCACAGAACGCTGTTGTAGTTTGTTTGTCACCATCTA CGATTGCCAACTCGTAAATATCTGATTCACACTCAGGACAAACTTCTTTC ACCTCTTTGCAAGATTGGAATGGTGGGCATTTCTAAAAAGAGAAAGAATC TAAGATAAGTGAACCTTCCCTTTGCGCAAAGGACGTTGCACAAAGGAGAG GAGGCGAACCTACCCTTTGCAAAGGGTATAGGCTCTAATCTAAAGCTGGG TTCAAAGCGCTAAATAAATAACAAGTAAAAGTGTTTGGAAAAATGTCTAT TCAGTGACTTGTTAGTTTACGATTTCAATGAAACCGAAGTTTAGTAATCA TTAATAAATTTATCTAAAGTTAGAAGATTACATCATGCTCCTCAAACATA ACTCCATCGCTTCCAGCATCATGTTCCCAACTTCTCATGCAGTGGCATTG CTCTTTCTCCGGCACATAAAAACTTTTCTGCATTTTTCTTTGACATTTCA ATGTACATTCGATTGGTGATCTTGCCGAAATAATGTTCGATTTGGTTGTC GTGCCAACGTTTCCTTCTGTTTCTTCCTGTGTATACCATCTAGCGTAAAC CAAAGCCATTTGTGTCAGAAAAATGCTTGAATACATTTTTGAAACAGTTT GAAGCTATGTTACACTTCACGTCTGCTTATGATCCAGAAATTAAAACTTT TAAAATGTTCAAAATGTTTTTTTTTAGTTCTAATATTTTTTTGAGGGAGG ATATATACATTGGAAATTCAATTAGTATAACGTATTAATATATTACCTAT TTTGGTCTAAATTAATTATGTATTTGTTTTCAGTCATGAATTTTTAAAAC CTTCTATTTAGTTTGACCATATTTATATATTCCCCTGGCAAAGAATTAAC TGCAGTATATATAAGAACATAAGGCTTCGATGGCCAAAATATTCAGAACA AGATAAGAACATTTTAAGGCTTTGCGGACTCTAAAACACGCGAGAGAAAT GCCCACAAAATCGTGAAAATATGAACATAAAGAACATAGGCTCGTAACTC AAAAAGTTAAAAGAACATCCGAAGTCATCAAAAATTTTGGATGTACTTAA AAAAAAAGTTAATCATTTCTTCTTATCCATTTCTGAAATATAATGCTCAT GTAATTATGAAATAGTTCTTATAAAAAAGCTGTTTAAATTTATTCCGAGA CTATTTAACCATTGTGTCAAAATTGTCAAAACGTTGCTCAGTGATGAAGC AAACAGGAATTTATCATTCAAACCAGCAAAAAGATTAGATACAAAAAAGA TCAGATTTGGAAAATTTTTTGTAATATTTGGTCAAAGATTACTCTTAAAT CCTTTAAAGAAAAAAATCGTACTTTTTTACTTGTCCTTTAATTTTATTGA TACTACTAATCTAGACTAGAATATTTCCTCAAAACTCTCCGGTCACTAAA AAGCTTATCGAAGTAAAGAAGTCAAAATGTACTTGCTCCAAAAACCTTGA CTCCATCAGATGATTTCCCCGTAAAATTTACCTAAGGTGATTTTCATCCT GATATGGGATGAATATTATAAACTAACTTTTTAAAGGCAGTGAACAATCA TGAATATAAACATAAGACCTGAGCCACATTCGCACTTCATGCAAAAGGGA ATAACGTGCTTTTGAATGTTTTAGCTGAGCAAGTAGGTCAGAACTTCACA TACGCCGCATTCCTACAAATTCTACATACCGTATTACTTGAAATAAACAC CCGGGGTGTTTGTTAATTTTGAATTTTTTACGAGGGGCGTTTATTAGAGG GGTCGTCTATTCGAAGTAATGCAGTAGGAGATTCGAAACCATATTGGATT TATCCGTTAACTTTGTTTTTCATTCCGATGAATATTGACTTGTCTAGGAT GAATATTAAACGAACTCAAAGTGAAAGATGGCACCAAAAGCTTCTGCCAA TCATAAACATCAACATCTCGATTTTATGCAAAAGGGAATAAGGTTGTTTT AAAATATTTAGGCTACACAAGCAGGTCATCAACATTCGCCGCATCCCTTT TGAGAAGAGGATGGCACTGGCAGAATAGGCTGACTTGAACCTGAACTACA TCATTGATTGAATTTACTTCAAATCAAAATAAATCATTTTTTTCTTTTCT CGTCATAGATGGAAGTCTTTGCATCTCGCCATAAAGACGATAACAGTGTA GCATGCATCATTGATCGATGTTATGTCATCACTCTGCCCCAATATAATAG GTAATGTCCGTTTCTTTCATATCAAANTTGCATCTCGCCATAAAGACGAT AACAGTGTAGCATGCATCATTGATCGATGTTATGTCATCACTCTGCCCCA ATATAATAGGTAATGTTCGTTTCTTTCATATCAAAAGATTTGGTAGGTAA CGCTCTACACTGATCTACATTTTCAATTGTTACAAACAGTTATAATGTTT GACTCTATAAAGTTTCGAGCCCTCGCATTTTTTTTTATTCTGTAACCCGC ATCTCGTAACTCTCATAAATTTTCGCTTACTTTTAAATCATCCACCTACC AATCAAAATTAGAATACAAACTCCGCAATTCAAAATTTCAAACAGTTTTT TTTTGTCTCTTTCAAGATACAAAGCACACAAGCAACGATGGGAAGAGAAA AGAAACCGGAAATTGGTCGTAGTTCCGGAAGTAAAAAATCACCGGTCACG CCTTTTGCCAAGCCCGGACTTTGATCCTTCCTTAGTTTATTTTTGTCGTT TTGGTTACGATTATCGGTCTGGAAAATTGATCAAAAGTACGTATTATTGA AACTTCTTTGAGGTATTAAAAATTTAAATTTTAGTTAGTTTTTTAAATTT TAAAGTATAAACGGATCATTTTAAGCAGATGAGATGGAGTTTTTATAAGA TACTTTAATAATTGGTTATTTGAATTGATAAAAATGACGCGTTCTTTAGA AAAAGTAGCAAAATGGTTTTATTATTGGTTAACGACCAACCAAATCAAAT AAGAGCTTGTAAAAACTCGTCCCGTTTTAAGAAAGTCTTACCTCCATTTC TTTGGATCCACTGTCAAAACTTGAAATTCTTTAACACGTGCACTGTCAAA CCCTTTTCAGAAATCGAAAAATTGTGGCCCTAATTTTTTCTTCAAATACC TCCAAGTTGTGCACCAATCGACACATTTTCTGTTTGTGAATTTTGCACAT TTTAATAACCAATTGACCCCCCCCTACAAAGAGCGTAGTCGTAGTCGGCA GCAAATATATTAATATGTTTGGGAAAAAGAAAGCTAATTCTTTAGGAAGA ATATAATTTTGCATACAGATTTTACTTTAGATCTTAAGAAAAGCCGTCAG TTTTTTGAAATTCCCTCGTCCTGACATAGAGGGCTGCTCATTCNACCAAT TCCCCCCCCCCCCCCTACAAAGAACGTATTCGTAGTCGGCAGCAAATATA TTATTATGTTTGGGAAAAAGAAAGCTAATTCTTTAGGAAGAATATAATTT TGCATACATATTTTACTTTAGATCTTAAGAAAAGCCGTCAGTTTTTTGAA ATTCCCTCGTCCTGACATAGAGGGCTGCTCATTAATTCATTAACTCTTTC TATATCGTAAAAATTGATGAAATCGATGTTTTTTTCAGTTTTTAGAAGTG CAAACTTCAAATCGAATTGTCTCGGCTCTGACAAAAGTAAAAATGGTCAA GTTTGAGATCATTGGACAGCTCCTTCAACATCTGTTTATTTCCCAAATGA AAGCTAAAGCAGCCAAAAGAAAAGTCATGAAATTTGCAAAGAGTTTAGAG GGTTTTCAGTCTTCGTTCAGTCTTCGTTCGTCTTTTTAAAACTTTGGGGG AAATTTCCGATTCCAGGTCTTGATCATAAAAATGTTGCAATATTGTCACT TTTTTGATGAATGTCTTCTTTTTGTCAACGNAAATTTGCAAAGAGTTTAG AGGGTTTTCAGTCTTCGTTCAGTCTTCGTTCGTCTTTTTAAAACTTTGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060435TCONS_00060435Clytia hemisphaericatranscript
TCONS_00060434TCONS_00060434Clytia hemisphaericatranscript
TCONS_00060433TCONS_00060433Clytia hemisphaericatranscript
TCONS_00060432TCONS_00060432Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060435-proteinTCONS_00060435-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_341supercontigscaffold_341:461698..467997 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.5 4.56 2.04 1.54 6.19 4.39 5.72 5.25 3.18 5.09 5.65 2.84 4.24 5.36 4.91 5.39 4.67 4.8 4.13 3.77 5.11 5.58 13.05 11.09 3.92 3.68 3.86 2.78 9.17 10.51