XLOC_037912 (gene) - C. hemisphaerica

Overview
NameXLOC_037912
Unique NameXLOC_037912
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_339:229296..234427-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037912 ID=XLOC_037912|Name=XLOC_037912|organism=Clytia hemisphaerica|type=gene|length=5132bp|location=Sequence derived from alignment at scaffold_339:229296..234427- (Clytia hemisphaerica)
TTCAGATTGAATAAGTAATAAAAAAACAAATATGAATTTATGGATGTATT ATGAATGAGTTAAATGGACCTCATAATCAAATTGGAACAATTAAAAAATG TCTTTCCAAATCTTGGACTGCAAAAGTGGATGTTTTCAGGAATTGACCAT CGTCAGTAAACTCGACAAGGGTGCATTTGGAGATGTTTACAAAGTGGAGG ATGCAAGAAAACATGTTTTCGCTTTAAGGAAAATGACCCCTGAACATTAT TTAAATACAAAAAACAATAGCGCCTCGAATGATAAACTTTATCAGGATGT TGTTGGTAATTTGCTATATACCATGTCCTGCTTAAAACACCCTCATATTG TTCAATTGTATGCTTTCGATTTTGAAAGTACATCTACATTACTAGTTATG GAGTTTTGTCCTGGAGGAAACTTGAATAACCGATTACGTGACCCTGTCAA TATGAAACAAAAGTTTGACTGGATGTCACAATTACTGGAAGCAATGACTT ACCTCCATAACAATAATTTTGTTCACAGAAACTTCAAACCTGAAAATGTG CTGCTTGGTAATAGAGGGCAGGCAAAAATGGCTGATTTTGGACTTGCTCG ACCGTTTTTAACGCGAGATTTGAAAAATAACGAAGATTACCTTTCAGAAT ACGAAGACATGTTTATGGACAAATATGCAGGTACCATGTATTGGATTGCT CCTGAAGTCTTTGATCGAAAATATACAGAAAAGGCTGACATTTTCTCGCT TGGGGTGATATTCTATGCTATTTTGACAAGGAAATATTTAACTTATCAAG GTGAATCTTATTATTATGGTGCATTTGTGGAGCATCATGGGAAAGAAGTT GGCCTTGGACTTGCTATGCATCGTTCTGAGAAAAACATTGAACCAAGTTT CGAGGGATTGAAAGAGACAATAGAACAAGATATTGCAAACAATGTAATCA AAAGTCTGCTTTGTTATGATTACAATAAAAGAATGAGTCTAGACCAAGCA CACTCTTTCATTTTTGACGCACTCGCTAAAATTGAAAAACAATGCGAGAA ATCAGTACTTGAAGCAACAACGAATCCACCTGCAAGAAGGAAACCTTCGG TAGCCGGCTATTTCTTTAGTAAGTATTTTGTGGGCGAGGTTTTCTTAGGA TACACGACATTTTGACATCTTTAATTACCTTATTTTGGGGTTATTTAGAC GTTTGTTAAAATTTGAAGATTTTTCCAACCCCTCCCACCATTTATGAGAC ACCTGAGAGTAAGATGTTTGAGTAAGATGTTTAAACATCTTGAGAACAAG ATGTGTTGTCTGTTTGGATTAGATATCTGGACGGGTTGGATGTATACTTT TTTGAGTTGAAAGTGACAGCTATGAGTATTAAGTACAAGGTATTTTGTTT TAGAAATGGCATCCCATATTTTTCTTGATGATTAAAAAGAAGAACAAGTT TCTAGATACACTTTTTTTATAAGCTTAACGTTTATAAGCATACGTAGGCT CACTTTTTGGTACCTAAACAATGGCTCTATTGTTTAAGAACAATCGAATG CTAATCATAATGCGAGCCTCGTATAGGTGTAGACGCTTGCTTATAAAAAC AAAGTGTTGGGGTCCCTTTTTGAAACCCCTAAAAAGGGGTTGATGGTATT TAAGTTTTATTTTAAAATCGTGTTCTATGGAATCTATGGTCGTTTCTTGT ATTTATTGAAGAGAACATTGTGTACCAATAATTTGAAGTACTTTTACTGT AGAACAAAAAAGAAGCTAAAGTTTAGCTTGAATGATATATAATGCCCGAT GTCCGATTTTGAGCTTTGGCCTGGTCAAATAATAAAAGTCTCATTGTATA CAGGGTGTCTCGAAAAAAAATCATGTGTTAAAACATGACTAAAAGTAGAA AAAACTCGTGTGTCTATGTCAAAATTAAGTATTTACGTTAGGGTTTCATT ACACATTTTTTAGTACGTGTATTGATTTTATAGTTTTAAAAAAATGTTTT ATTACAGAATTGATATTTTGATTATGTTTTTATAAGTTTGCTTCGTTGTA ACCATTTAAGTATTACTTAAAGGTTTTCTACGGGAATAAAAGGAGCTTAT TTTAGGCAGTGCCTTTATGTTGAGTCAGATAAATAAAAGCTACTTTTTTA CGCAACGACATCCTGCAAACAAGTGAAAGATCGAAAGTTGTTTCGAGATG TGACCTCACATTCTATTGCTTTTGTAAACAAAAAATAGCAAAGTTGATTT CAAACAAATTTACAATCGAATGTTTTGATTATAAGACGCTCTATTTATTA TAAACATAAAGCATTCGAAAGAGTATCAGTAAAAGTCCCTTTGTTTGAGA AATGTTTTTTTATTCAATGTATTTTCATTTTTTCAAAACCTTTTTCTAAT CTTGTCGCGTTTGTTTTTACTACATCAGCATCGTCAGACCTTTCAATCAA AACAAAACCTTTAATGTGTTTGTGAGAAACATAAAAACTTTTCTACTTGT AGTCGTGTTCTAACACAGGACTTTTTTTCGGAACACCCTGTATGATATTT TCACCCTTTTAAGTTAATATTTCCTTGTTTGTTTTCTTTATTTAGAGCGT TTTGTACCGGGATTTGCTGCATGTTTCGACGAAGGGAAACATGTTGTTGG GAATATCGACAATACTGAACAAAAGGATGGAGAAGGAAATGTTCCTCGTG AACCTTCTGATCGGCCTGGAAGTGAAAATGCGAATCAAAATATTTGTTCT GTCTCATCTCAGAGTAGGTGGTCATTGTTTTCAATTATGCTCATATGGGC TAATCTAAAGATCCTCATATCCTACATCTGTGTTGTTATTTCTCCTCATT TAACATTGAAATTTCACATGACTTGTTCGATTTGTTCACGACACTCGCAG CCATTCCTTTTTCTTTCAAAAAATCCATTTTCTTACTTTCATTCTCTTCA AATCTTTCAGTAGATTCAAAAAATGATGTTTTGAAAAACTTCGAACAACA TTATTCCTGTCCTATTTGTTTGGACATCGTCTGCGAAGCAGTTGAGTGTA AAGTTTGCCNATCTGGAGAATTTCAATATTCAAAACAAGAGGAGTGCTCA TAGCCCGAAGAGTAGGAGTTTTACGCTCGAAACGAAGGAAGATATGACGT AGCCTAACATCTGTGTTGTTATTTCTCCTCATTTAACATTGAAATTTCAC ATGACTTGTTCGATTTGTTCACGACACTCGCAGCCATTCCTTTTTCTTTC AAAAAATCCATTTTCTTACTTTCATTCTCTTCAAATCTTTCAGTAGATTC AAAAAATGATGTTTTGAAAAACTTCGAACAACATTATTCCTGTCCTATTT GTTTGGACATCGTCTGCGAAGCAGTTGAGTGTAAAGTTTGCCACAAGCTG TATTGCGATGAGTGTGTCCGAGAATTGAACACGTGTCCGAGCTGCTGCCA ACCATTTAACACTCAGCCCAACAAAAATGTCCGACAATTTATCGGGAATT TGAAAACGAAATGCCCAAACGAAGAATGCCGTGAAAAACCAACTCGATCA AATCTTCAAGAACATTTAAAGAAATGTGAATGGGCGTTGACATTGTGTGA AAATGAAGGTTGTGAATTAGAATTTCGGAGAATAGATTTGCCGAAACATC TTTTCGATTGTTCGTATCAGATCGTATTTTGTAGATCGGTCGGCTGTAAA GAGTCGTTTCCCCGAAAGCGCTTTTTTCTTCATAAAAACGAGTGTTTGTT CTCTCCTGTCAGATGCTTGGATTGTTTGCAGTTATATCTCAAAAAAGACG AAACCGTTCATTTTAAGATGTGCAAGCGCAAGAAAATCGAATGTCCTATC TGTCAGCTTGAAGGAACGAGGTTGGACATTTTACATCATGGTGTAGATAT ACATTATGATAATGTGGTGACACCCTTCTACCAATCGATGGTGGTTTCTG CTTCGTCCTCAAGCCATCAACCAATATCGCAAGAAGAGGACAGGTTATTC GCGGAGTTGGATTGTATTTGAAATTTCGATTAAACTTGTAAATATAATAT GACGGAGCCAACCCTTAGGATCCTCAGCATCTTTCGTGGACGCAATATAC CTTTTTGACCGTAGCCGCCAATTGCCGCATGGGCATTTTTTATCCATTTT ACCACCCTAAAACCGTCCTATTCTTTTTTACGCACCTAAAGACAACAGAA GAAAGTGTAAAAAAGGATTGGATCGAGTTTAGGGTGGTAAATTAAATAAT AGAATTGCACGCGCCTGACCGCGCCAAAAAGGTGTATTACATCTTATTGG TTTGACAGTAGATAGGATTTTGAAACTTTTTAGAGAGGGGCCACGGATCA GGCCTGACAAAAATTTTAATGGCCGAAAGACTGACGTTACAGACAGAATT CTTAACCTCTAAAATAAGCGAAAATGACGAATTTTAAAAGGCGAATTCAA CAGAAATGATTTCTTTTGGACATTTTAAAATATTTTTATCAGCCTCATTT CGACGAGTGCTTTTCTCCAACTTGTTCAGTAAACCGATTAGGGCACAAGT TACTTGCGAGAAGAATTTCGAGTGGAAAGAACCAGAAAGAACAATATTGT TAAAAATGATTACTAGTAATTTAAAATGTCGGGGCTCAAAGGAAATTAAA GGGAGTTTGAACCTTAATATTGTAGATTAACATTAAATTTAATATATAAT TTCATTATAATCTTTTAGTATAAATTGATTAATTTTGTAAATGAAATTTC CGTGAATTAAAAAATATTTTTGTTGAAATTTGTCCATTTTATATTTTTAT AATTTTCGAAAATTATTTTGTAAGATATATTTTTTTTAATCCACTTTTAA TATTTTTTTGTTTTTGTCTTGCTTAATTTCTTTTTAGCTCCTTGAACAGA TGCTAAACCAAATACCAAATGGCTGTGCTATCTACAATAATTGTAGATTC ACATTAAATGATAATTAAACTATAGGTATAGTATAGATTATAAATTTTTA GTATAAATTTATTAATTTTGTTATTGAAATTTCCGTGAATTAAGATAGAT ATTTTTTATTGAAATTTGTCCTTTTTATGAGTTTTTTTCATATTTTTTAA ATTTTCGAAATTTCTTTTGTAGAATTTTTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060274TCONS_00060274Clytia hemisphaericatranscript
TCONS_00060273TCONS_00060273Clytia hemisphaericatranscript
TCONS_00060272TCONS_00060272Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060273-proteinTCONS_00060273-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_339supercontigscaffold_339:229296..234427 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.97 2.01 0.83 1.03 5.19 2.83 3.36 4.53 2.67 4.2 3.38 1.95 4.93 5.14 6.06 7.22 3.82 4.53 5.24 6.26 4.34 4.35 5.44 6.12 5.39 6.23 3.24 3.95 4.05 3.32